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SCNpilot_expt_500_p_scaffold_2812_curated_7

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(6103..6426)

Top 3 Functional Annotations

Value Algorithm Source
Putative IS2 repressor TnpA n=1 Tax=Leptospira weilii serovar Topaz str. LT2116 RepID=M3H2Y5_9LEPT similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 100.0
  • Bit_score: 117
  • Evalue 7.70e-24
Putative IS2 repressor TnpA n=1 Tax=Leptospira weilii serovar Topaz str. LT2116 RepID=M3H2Y5_9LEPT similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 100.0
  • Bit_score: 117
  • Evalue 7.70e-24
Putative IS2 repressor TnpA {ECO:0000313|EMBL:EMF83110.1}; TaxID=1088540 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Topaz str. LT2116.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 100.0
  • Bit_score: 117
  • Evalue 1.10e-23

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Taxonomy

Leptospira weilii → Leptospira → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 324
TTGGAGAAGAAATCTATTGTTGAAGAGACCTATGAGGCTGGTAAGAGCGTTTCTTATGTTGCTCGTAAACATGGGGTTGCAGCTTCCCAAGTCTTTATGTGGCGCCGTAAGATGGGAGAAGGGGCACTTGTGGGCATAAAGAGCGAAGAAACCGTTGTTCCTCAGACTAAGTATAAGCAAGCCCTTGATCGGATTAAGCGGCTAGAACGTTTGCTTGGACAAAAAACCGAGGAAGTAGAGATTCTGAAAGAAGCTATCAAGATTAGTCGCGAAAAAAAATTTATCTGGCACAAACCATTGCCAGAATCAGGAGATTCCCAATGA
PROTEIN sequence
Length: 108
LEKKSIVEETYEAGKSVSYVARKHGVAASQVFMWRRKMGEGALVGIKSEETVVPQTKYKQALDRIKRLERLLGQKTEEVEILKEAIKISREKKFIWHKPLPESGDSQ*