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SCNpilot_expt_500_p_scaffold_59_curated_24

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 24740..25339

Top 3 Functional Annotations

Value Algorithm Source
cell envelope biogenesis protein LolA n=1 Tax=Thalassospira lucentensis RepID=UPI0003B77936 similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 135
  • Evalue 5.10e-29
cell envelope biogenesis protein LolA n=1 Tax=Thalassospira lucentensis RepID=UPI0003B77936 similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 135
  • Evalue 5.10e-29
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 199.0
  • Bit_score: 346
  • Evalue 3.50e-92

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAAAAAATTACGTTTTTTATCCCTTAGCTTAATACTTCCGTTGCTGGTTCTCACTTCGAATGCTCAAGGAAAACCTTCTCAACAAACTCTCAAAATGTTGGAGACTTACTTAAATAATGCTCGCACATTCACAGCTGATTTTGAGCAAATTGATAGCAATGGGAAGCTTTCTCATGGAAAATTTTATCTCTCACGCCCCGGAAAGTTGCGTTTACAATATACAGATCCAACCCCTTTAACAATTACTGCAGATGGTCAGTTTCTTATCCACCATGACCCCAGTACGAAAGAAATTACAACAATGGCTATCTCTGAAACACCTGCCGAGTTCATCTTGCGCCAAAATATAAGTTTTGATGAAGGCATTACAGTGATACAATTTCAAGAAGAGGGAAACTCATATAAAGTAACTCTCGCAAGAAGCAATGCGGCTGAAACTGGCACCTTAACCCTTAAATTTTCTAAAAAACCTCTACATCTTGTTCAATGGATTGTTATTGATTCCCAAGGCCTTGACACAACTGTTAACCTTATGAATTTAAAGTCTAATACCAAAATTGATCAAAACCTTTTTGTTTTTCAGGAAGTGTCCCCTTAA
PROTEIN sequence
Length: 200
MKKLRFLSLSLILPLLVLTSNAQGKPSQQTLKMLETYLNNARTFTADFEQIDSNGKLSHGKFYLSRPGKLRLQYTDPTPLTITADGQFLIHHDPSTKEITTMAISETPAEFILRQNISFDEGITVIQFQEEGNSYKVTLARSNAAETGTLTLKFSKKPLHLVQWIVIDSQGLDTTVNLMNLKSNTKIDQNLFVFQEVSP*