ggKbase home page

SCNpilot_expt_500_p_scaffold_5901_curated_4

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 2385..3410

Top 3 Functional Annotations

Value Algorithm Source
HTH domain of SpoOJ/ParA/ParB/repB family n=1 Tax=Smithella sp. ME-1 RepID=V4FC68_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 21.8
  • Coverage: 331.0
  • Bit_score: 94
  • Evalue 2.20e-16
HTH domain of SpoOJ/ParA/ParB/repB family n=1 Tax=Smithella sp. ME-1 RepID=V4FC68_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 21.8
  • Coverage: 331.0
  • Bit_score: 94
  • Evalue 2.20e-16
HTH domain of SpoOJ/ParA/ParB/repB family {ECO:0000313|EMBL:ESP62858.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 21.8
  • Coverage: 331.0
  • Bit_score: 94
  • Evalue 3.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Smithella sp. ME-1 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGAGATTGACTAACTTACTTTCTAATGAAGCAGCTTCATATGCAGAAACTCCGATTTATTTAAGATCCAATATCGGTACTTACCCTGCTCCTTGCTATGTATGTAGAATCTCGAATGTTCAACGTTCTATTTTATCAATAGTTTCATTAGTAGACTACAGCAGCTCTAAATACAAAATCATCCCTCATGAATCTGTAAATGAAAAAAAGGTGAATAACTATAAAGAACAGCTTTTTTCAGAATTTCAATTGATTAATCCCATTTTACTCTTTTATAAAAAATATCCTGAGTTTTCTTTATTTTTATCTACTTTGATTAATAATAAAGATCCAGATACTACACGCTTTATCAAAGGTACTACATACGAAGTTTGGTCAATTTGTGATTTAAAAAAGTTATATAATATCCAGAAATATTTTCAGAAAATTGAATATTTCTATGTTGCTGATGGACATCATAGGATTGAAGCTTTAACTAGTCTTAAGGACGGTGGGTTATATCCGTATCCACAGCAATATTTATCATTAATTTTGGATGAGAGAGATTTGGAATTGACAAGCTTTAATCGTTTTATTCGCGACGCTACACTTGATTCCTCAGATCTGATGAAAAAACTTAGTAACTTATATAAAATCAAAAAGGTTTCACCGCATTTTTTAAGGATGCAAAAAAATATATATTTTTATACGGGGAATTGTTGGTATGAGCTAAGAATAGATGAGTCATTTCACGAAAGAGATCAATTGTTTCCAGCAATTTTTCTCGATAAATTTTTTATTTCAGAGCTCGAATCACAAGGAATGTTTAGTTTTGATAAATTTTTATATCTTCCGCAAACAAATAAGGTAAATGACATCATCAACCATTGTAAATCTTATGATTGTAAATTAGCTATATCTATTCCAAAGTCTCTTCTTTCAAATTTATATAAGATTACAGAAAAAGGAGACCGTTTGCCTCCTCATTCAACATGTTTTACACCAAAAATACCTGATAACTTATTTATACAACACCTTAAGCCTTAA
PROTEIN sequence
Length: 342
MRLTNLLSNEAASYAETPIYLRSNIGTYPAPCYVCRISNVQRSILSIVSLVDYSSSKYKIIPHESVNEKKVNNYKEQLFSEFQLINPILLFYKKYPEFSLFLSTLINNKDPDTTRFIKGTTYEVWSICDLKKLYNIQKYFQKIEYFYVADGHHRIEALTSLKDGGLYPYPQQYLSLILDERDLELTSFNRFIRDATLDSSDLMKKLSNLYKIKKVSPHFLRMQKNIYFYTGNCWYELRIDESFHERDQLFPAIFLDKFFISELESQGMFSFDKFLYLPQTNKVNDIINHCKSYDCKLAISIPKSLLSNLYKITEKGDRLPPHSTCFTPKIPDNLFIQHLKP*