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SCNpilot_expt_500_p_scaffold_4748_curated_3

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(560..1834)

Top 3 Functional Annotations

Value Algorithm Source
putative conjugative transfer protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDF similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 428.0
  • Bit_score: 255
  • Evalue 1.20e-64
putative conjugative transfer protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDF similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 428.0
  • Bit_score: 255
  • Evalue 1.20e-64
TraB pilus assembly {ECO:0000313|EMBL:EKE08829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 405.0
  • Bit_score: 243
  • Evalue 3.90e-61

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGTGAACATCAAACTCCTCAAGCCCTTAAAAAGAAGCAATTCCTAATATTATGCGGTGTTGGAAGTCTTTTGGTCTTGGCCCTCCTTTTTCTCTTTGATGTCGTGACGGGGCCTAAAGAACCACAACATCACTTGAAGACGCAAGAGTCCAAAATTGCAGGTACAACCTCCCATCTTGATCCCCGAGAGATTTGGGCTGGGCGCATGGAAGAAGAATCTAAAAAATTCAATGACAAGCTTTTATCGCTTGAAGGCATGCTCAATAAAACAATTGCTGAAAATGCAAAGCGAACGACCCCTCAAGACGAAAATGCCTTGCAACAGTTGCAAGAACAGATCAACACTCTTCAACAGCAACTGGAACAGAAAACTCAAGAATCTATTGAGGAAAAAAACCAATCTCATTATCCAAACCTTGATGGACAAGCCTCTAAGAAAATCGTCTTAAATCTCAAGAAAAATGTTCGCTATGAAGCCCATCAAAACAGAAAAAAGGTTGAAGATACCATCCCTGCTGGCGCTTATGCGTCTGCCATACTTTTAGGGGGTGTTGATGCTTCCACATCTGTTAGTGCAGCTAATGATCCACGGCCAGTACTGTTAAGGGTGATTGATCCAGGAACCCTCCCACGGAAGTTCAAGAGTGATTTGAAAAACTGTCATGTGTTGGCCTCTGCTCATGGGGATCTTTCATCTGAACGTGTTTACATGCGCCTTGAAAAACTCACGTGCACAGAACCTTTAACAGGCGAGATCTCAGAAACCCAAGTGGCAGGCTATATTGCTGGTGAAGATGGCAGAGCAGGCGTGAGAGGCGTTGTCGTTGATAAGACTACTGACCTTATGAGGAATAGTCTCTTAGGTGGTTTTGCAAGTGGGATTAGTAATTTCTTGCAAGCCAGCAATCAAAGTAGTGTTTTCCCAACCACGCCCTTTGGTCAGAAGAATGCTCTTACAGATGATCAACTTCTTAAATCGGGTGCTTATAGCGGCATTGGTAATGCTTTAGAGAAGTATGCTGATTACTACATCAAACGCGCTGAGCAATTGCAGCCTGTTCTGGTGGTTCAAGCAGGACGTAAGGTCAATATGGTCTTCACGGAAGGCACCAAGTTTGGGAACACGACCGTCAAACAAGTCATTGCTGAAGCGAGAGACCAAGCTCTGTCCCAATCAAGAGACAAAATCCAAGTTGAAGCCCTTAAAGAAACCAACAGCCAGAATAGTGAGAGTATTCACCGCTGGCTTCCTAAAATTGGAGAAAATCAATGA
PROTEIN sequence
Length: 425
MSEHQTPQALKKKQFLILCGVGSLLVLALLFLFDVVTGPKEPQHHLKTQESKIAGTTSHLDPREIWAGRMEEESKKFNDKLLSLEGMLNKTIAENAKRTTPQDENALQQLQEQINTLQQQLEQKTQESIEEKNQSHYPNLDGQASKKIVLNLKKNVRYEAHQNRKKVEDTIPAGAYASAILLGGVDASTSVSAANDPRPVLLRVIDPGTLPRKFKSDLKNCHVLASAHGDLSSERVYMRLEKLTCTEPLTGEISETQVAGYIAGEDGRAGVRGVVVDKTTDLMRNSLLGGFASGISNFLQASNQSSVFPTTPFGQKNALTDDQLLKSGAYSGIGNALEKYADYYIKRAEQLQPVLVVQAGRKVNMVFTEGTKFGNTTVKQVIAEARDQALSQSRDKIQVEALKETNSQNSESIHRWLPKIGENQ*