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SCNpilot_expt_500_p_scaffold_256_curated_28

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 31604..32539

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 529
  • Evalue 3.40e-147
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 529
  • Evalue 3.40e-147
Tyrosine recombinase XerD id=2697450 bin=GWA1_Alphaproteobacteria_45_9 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 306.0
  • Bit_score: 304
  • Evalue 1.30e-79

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGAAATATCTTAATCAATTTTTAGAAAGTTTGTCTGCTGAGCGAGGATATGCTTTAAATACGCTTGAAGCCTACGCCAGAGATATAAAAGATTTTAATATATTCTTGAAAGAAAAGTTATTAGAAGATGTTAAGAAAATTGACATTCAACAATATCTTCTTCACCTAAAAGAACGTGCTATAGTCCCCTCTTCTCGTGCAAGAAAAATTTCTGCTTTAAGGCAGTTTTTTAATTTTTTACTTGAAGAAGAAGTTGTCTCTGAGAACCCAACTCTTTTAATTGATTTGCCAAAGCAAGAACGTCGGCTTCCTAAGACACTTACTGAAGAGGAAGTTTTTGCGTTAATTGAGGCAACACACGACCTTGATAATCGGGAGAGAAGTAGACTTTTATGTTTACTTGAGATTCTTTATGCAACTGGGATGCGCGTTTCGGAACTTGTAAGTCTTCAATTAAATACGGCATTAATAGCTTTAAGAACAGCTCAAGAAAAAGGAAATTCTGCTTTCATCATTAAGGGAAAAGGCAATGTTGAAAGGCTAACGCCATTAACACCTTCGGCAATTAAGGCTTTAGAAGATTACCTAAAAATAAGAGAAACGTTTGAAGCCGGCGTTAATGGAAAAAAATGGCTCTTTCCTTCAAGAAGTGCTGAAGGGCATCTAACCCGACAAAGGTTTGGGCAACTCTTGAAGAAAATCTCTCTACAAGCAGGAATTTCAACCCAACGCATATCTCCTCATGTCATGAGGCATGCTTTTGCAACACATCTTTTACATCATGGAGCAGATCTTATAAGTGTACAAAAACTGTTAGGACACTCAGATATTTCAACGACTCAAATTTATACCCATGTTGTGGATTCTCAAAAACAAAAACTTGTTTTTGATCATCACCCCTTGTCAGATGCAACAAAAAACTCTAGGAAAGCATAA
PROTEIN sequence
Length: 312
VKYLNQFLESLSAERGYALNTLEAYARDIKDFNIFLKEKLLEDVKKIDIQQYLLHLKERAIVPSSRARKISALRQFFNFLLEEEVVSENPTLLIDLPKQERRLPKTLTEEEVFALIEATHDLDNRERSRLLCLLEILYATGMRVSELVSLQLNTALIALRTAQEKGNSAFIIKGKGNVERLTPLTPSAIKALEDYLKIRETFEAGVNGKKWLFPSRSAEGHLTRQRFGQLLKKISLQAGISTQRISPHVMRHAFATHLLHHGADLISVQKLLGHSDISTTQIYTHVVDSQKQKLVFDHHPLSDATKNSRKA*