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SCNpilot_expt_500_p_scaffold_256_curated_39

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 43261..44088

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 275.0
  • Bit_score: 522
  • Evalue 4.90e-145
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 275.0
  • Bit_score: 522
  • Evalue 4.90e-145
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 277.0
  • Bit_score: 261
  • Evalue 3.50e-67

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGTTAATTCCATTTGTAAAAATGCATGGTCTTGGGAATGATTTTGTTATTCTTCAGCGCGACCAACTTCCTGCTATGCTTGATAGCAAGCATATAAGAGCTATTTGTGATCGACGATTTGGGATTGGTTGTGATCAACTCATTGTTACTGAATCTTCGACAACTGCTGATATTTTTATGCGAATCTATAATGCTGATGGGAGTGAAGCTGGAGCTTGCGGAAATGCAACCCGTTGTCTAGGTTATTTATTGACGCAAAAGGATCAAAAAATTCCTCATACTATTCAAACGATTAGTGGTTTTCTTAAGGCAGAAACATTTGAAAATGGCAGAGTTAAAGTTGATTTTGGTTCCCCGAGTTTAAGATGGCAAGATATCCCTCTTGCTGAAGAGGTTGATACCCTGAATCTCCCTATTGAATATAACGGTTTGCAAAACCCTATTGCTGTTAGCATTGGCAACCCCCATATGGTCTTTTTTGTTTATGATGTTGAAAGTGTTGATCTTGAGAATCTTGGTATGGTTCTTACTCATCATCCGCTTTATGTTGAAGGTGCAAATATTGAAATTGTTGAAGTCTTAGACGAGCGTACTATACGTTTGCGTGTCTATGAACGAGGTGTGGGCATTACTCCAGCGTGCGGTACAGGAGCTGCTGCCAGCGTGGTTGCTGCAAAATGCCGTGGGCTTATAAAAACTCCTGCTAAAGTCATCTTGGATGGAGGAGAATTGTTGATTGATTATCAAGAAACCGTTACAATGTCAGGACTTGTTAATCTAACATTTCAAGGGCAGTTTAATTCCGCTCTTCTTCAGGATGTCGCCTAG
PROTEIN sequence
Length: 276
MLIPFVKMHGLGNDFVILQRDQLPAMLDSKHIRAICDRRFGIGCDQLIVTESSTTADIFMRIYNADGSEAGACGNATRCLGYLLTQKDQKIPHTIQTISGFLKAETFENGRVKVDFGSPSLRWQDIPLAEEVDTLNLPIEYNGLQNPIAVSIGNPHMVFFVYDVESVDLENLGMVLTHHPLYVEGANIEIVEVLDERTIRLRVYERGVGITPACGTGAAASVVAAKCRGLIKTPAKVILDGGELLIDYQETVTMSGLVNLTFQGQFNSALLQDVA*