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SCNpilot_expt_500_p_scaffold_256_curated_48

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(51081..51956)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=2 Tax=Corynebacterium RepID=C6RAF6_9CORY similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 111.0
  • Bit_score: 61
  • Evalue 1.80e-06
DNA-binding helix-turn-helix protein n=2 Tax=Corynebacterium RepID=C6RAF6_9CORY similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 111.0
  • Bit_score: 61
  • Evalue 1.80e-06
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EET77057.1}; TaxID=553206 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium tuberculostearicum SK141.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 111.0
  • Bit_score: 61
  • Evalue 2.50e-06

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Taxonomy

Corynebacterium tuberculostearicum → Corynebacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCGTAAAAAAATACTCACAAGTTGGCAATATTTCTGAGAATTATAAAAAGCATCCAACAACTCAAAAGGCGGTGAATACAGAGTCACAACCACAAAATATTCATTTTATGGCTCCGGCACAACCTTTTGGACGTACTGCACCAAATAAATTACTAACAAGGAAGCGTAAGCGTTCAAGACATCCTCTCCGTGATCTTAGATTACAAAGAGGTTACACTCTAGAAGAACTTGCTGATTTAACAAAGCTTTCACCTTCTTATCTTTCTCGTCTTGAAAGTGGCACTAGACGCTTAAATGCAGATATCTTACAGCGCCTTGCTCATGTATTATCTTGCCATCCTGGTGACCTTCTTTTAACGGATGCGCAAAGCAGTAAATTTGTAATGATGTCTCGTATGCAAAATGAGAATAATGAAGTAACCGATACAGCTTCATCTGTTCGCTTTTCAACCCCTGATTTACCACTTTTTAAAGTAACTAATAAAAACTCTAAAAGTTTTATTGACTTTGAAAATCCTCAAGAGTGGATTGCTCGGCCACAGGAACTTATTGGCATTGCAGGCGCTATGTCTTTTTGTGTAGATATGGCTAGTAATAATTTCGGGCCAAGATATCGCTCTGGAGATCATATTTTTGCACATCCAACCAGGCCTTTATCGCCTCAATGTTCAATTTTGTTAGTTACACAAGAAGGAGAGGCAATTCTTGGTGAATTTGAAGGTTGGCAACAAGGAAATGATAAACTAGATCATTGTGTTGTTCACACGACAGAATTGACTCACAGCAATCAACTAATAACTAAACAACTTAGTTTTTCAAATGATAAGATCCAAACGATTTATCGTATCATTGGACTTATGGAAGCCGCTTAA
PROTEIN sequence
Length: 292
MTVKKYSQVGNISENYKKHPTTQKAVNTESQPQNIHFMAPAQPFGRTAPNKLLTRKRKRSRHPLRDLRLQRGYTLEELADLTKLSPSYLSRLESGTRRLNADILQRLAHVLSCHPGDLLLTDAQSSKFVMMSRMQNENNEVTDTASSVRFSTPDLPLFKVTNKNSKSFIDFENPQEWIARPQELIGIAGAMSFCVDMASNNFGPRYRSGDHIFAHPTRPLSPQCSILLVTQEGEAILGEFEGWQQGNDKLDHCVVHTTELTHSNQLITKQLSFSNDKIQTIYRIIGLMEAA*