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SCNpilot_expt_500_p_scaffold_256_curated_81

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(85214..86107)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=uncultured bacterium RepID=C5JB17_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 296.0
  • Bit_score: 337
  • Evalue 1.30e-89
Transcriptional regulator, LysR family n=1 Tax=uncultured bacterium RepID=C5JB17_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 296.0
  • Bit_score: 337
  • Evalue 1.30e-89
LysR family transcriptional regulator {ECO:0000313|EMBL:AIL12914.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 297.0
  • Bit_score: 586
  • Evalue 3.00e-164

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGATTGGGATAAACTACGAATTTTTCATACTGTCGCACTTGCAGGAAGTTTTACACGTGCTGCAGAACAATTAAACTTAAGCCAGTCAGCAATTAGTAGGCAAGTAAACGGTTTAGAAGAATCGTTAGGAGTTCCATTATTCTATCGTCACGCTCGTGGGCTTGTTATGACAGAACAAGGAGAACTATTATTTGAGTCAGTGCGTGAGGTTTTCTCAAAGTTAGCCATGACAGAAGCTCTTTTGAATGAGAGCCAAGGTCATCCACGTGGTCCTTTAAAAATAACAACTTCAATTGCTTTTGGTTCTATGTGGCTTGCGCCTTTGCTAGGTGAGTTCTTAGAGCTTTATCCGCATATTCGGGTAAATCTTATTTTGAGAGATGATGAGCCTGACTTAAATATGCGTGAAGCAGATATTAGCATTCCATCAGTTCCTCCTACACAACCGGATATGGTTGCTGTTCCTTTGCCTCCTTATCGCTTAAGAATCTATGGCAGTCGTCCATATTTTAAAAAATTTGGTGTTCCTGTAAAACCTCAAGATCTTGATAACCATCGCCTGATTGCGTTTGGAGATGAAATATCTCATCGTTTAAATAAAGTTAATTGGATCTTACATGCAGGAACGCGCCGTGGACAAAGTCGAGAACCTTACTTAATTGTAAATAATGCTTATGCAATCTTACAATGTGTCAAAGCTGGGCTTGGTATTGCAGGTATGCATAAATATATACTTGATAAAGATGATGATCTTATTGAAATATTACCTGAGCTTGAAGGAGCAATGGTGCAACGTTTTATTGTGTATCCTGAACAGCTTCGAAACTCAAAACGTATTATTGCTTTCCGACAGTTTATTGAAAGAAAAGCTTTAGAACATCAAGATTTTTAA
PROTEIN sequence
Length: 298
MDWDKLRIFHTVALAGSFTRAAEQLNLSQSAISRQVNGLEESLGVPLFYRHARGLVMTEQGELLFESVREVFSKLAMTEALLNESQGHPRGPLKITTSIAFGSMWLAPLLGEFLELYPHIRVNLILRDDEPDLNMREADISIPSVPPTQPDMVAVPLPPYRLRIYGSRPYFKKFGVPVKPQDLDNHRLIAFGDEISHRLNKVNWILHAGTRRGQSREPYLIVNNAYAILQCVKAGLGIAGMHKYILDKDDDLIEILPELEGAMVQRFIVYPEQLRNSKRIIAFRQFIERKALEHQDF*