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SCNpilot_expt_500_p_scaffold_256_curated_90

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 98257..98844

Top 3 Functional Annotations

Value Algorithm Source
lysine decarboxylase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B7390A similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 172
  • Evalue 3.70e-40
lysine decarboxylase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B7390A similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 172
  • Evalue 3.70e-40
Lysine decarboxylase {ECO:0000313|EMBL:KJB90949.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 195.0
  • Bit_score: 184
  • Evalue 1.70e-43

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGGAATTTGTTAAGTCGGCATGCGTATATTGCAGTTCTTTTAATGGGCTTTCTGAAAAATACCAACTTGCCGCGAAAGAAGTCGGCACACTTCTCGCAAAAAATAATATTAAATTGGTATATGGTGGGGGACGCATGGGCCTTATGGGCCTTGTTTCTAATGCTGTTTTAGAAGCAGGAGGAAGTGCTCTTGGAATTTCTACAACCCTCATTAGTACAAGAGAAGGTATTAATGAAAATCTTCTTGAGCTTATGGTCGTTGAGACCATGCATGAACGTAAACAACTTATGTTTGAAAAATCTGAAGCCTTTGTCATTCTACCTGGTGGTATTGGAACTTTGGATGAGACCTTTGAAATTATGACCTGGAAACAAATTGGACTTCATCATAAGAAGATCATTTTTCTGGATGTTGATGGGTACTGGTCGATAGTGTTCGAAACACATTTTAAACGTATGATTGAAGACGGTTTTGTGCGAGAAATCGATCAAAAATTATTTACAATTGCAAAAACGCCCGATGAAGTAATCCATAGTCTTTGTAATGGCGTCCAGCCAGATCAAGGTTATGTTGCAAAATGGGTTTAG
PROTEIN sequence
Length: 196
VEFVKSACVYCSSFNGLSEKYQLAAKEVGTLLAKNNIKLVYGGGRMGLMGLVSNAVLEAGGSALGISTTLISTREGINENLLELMVVETMHERKQLMFEKSEAFVILPGGIGTLDETFEIMTWKQIGLHHKKIIFLDVDGYWSIVFETHFKRMIEDGFVREIDQKLFTIAKTPDEVIHSLCNGVQPDQGYVAKWV*