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SCNpilot_expt_500_p_scaffold_679_curated_25

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(24889..26121)

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 410.0
  • Bit_score: 767
  • Evalue 9.90e-219
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 410.0
  • Bit_score: 767
  • Evalue 9.90e-219
Histidine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JAM3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 407.0
  • Bit_score: 475
  • Evalue 7.20e-131

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
GTGTTTCAGCCTGTTCGTGGGACGCATGACTTATTGCCTGATGAATGTCGTCAATACCGCTTTGTCGTAAAAGAAGCAATGAAAGTAGTGCGTTATTATGGTTTTGATGAAATCTCAACGCCTATATTTGAGTTTTCGGGCGTTTTTCATCGACTGGGTGAAACATCTGATGTTGTAAGTAAGGAAACTTATACATTTAAGGATAGAGGCGGCGAGGAGCTCACTCTACGTCCAGAAGGGACGGCAGGCGTTGTGCGGGCAATCATTTCCAATGGTATGGCTCAACATGCGCCTTTAAAACTTTCTTATGCAGGTCCTATGTTTCGATATGAACGTCCGCAAAAAGGTCGTTATCGACAATTTGATCAGATAGGCGTTGAGCTTATAGGAACAGCAACTCCTGTTGCAGATGTCGAAGTCATTGCAATGGCTCATCATATTTTAAAGGTTTTAGGGGTTGACTCTAAAGTTAAACTTGAAGTCAATACTTTAGGGGATTATGAAAGCAGAGAGGCTTATAAAAAGGCTCTTCTAGCTTATCTTACGCCATTGCGTTCTAAATTATCTCCTGAAAGCCAAGACAGACTTGAGCGTAACCCATTGAGAATTTTAGATTCTAAATCCGAACAAGATCAAGCAATAGTAAAAGAAGCTCCCGTTTATAGCGATTATTTAAATGCAACTTCAAAAATATTTTTTAAGGATGTTTGCGAGGGATTAGAAGTATTAGAGATTCCTTATAAAATTAATACGCGGTTAGTGCGTGGATTAGATTATTATTGTCATACAACATTTGAATTCATCACAGATGCATTAGGGGCACACAGTGCAGTTATAGCGGGAGGTCGTTATGACAATCTTGTTGAAATGATGGGAGGACCACATCTTCCTGGTGTTGGTTGGGGGGCAGGTGTTGATCGTCTTGCCCTATTAGGGCCAGAACTGCCAAAGACGATGGCTCCGGTAGCGATGATTCCTCTAGGAGATGAGGCTGAAAAGGTCTGCTTTAAGCTAGCTCAGGACCTCCGGTATAAGGGAATTTTTGTTGATATGGGTTATCATGGAAATTTATCTAAACGGTTAAAACGCGCCGATAAAATAAATGCAACTCATGCTATTATTATTGGTGAAGATGAAATAAGAGCACAAGAAGCTCTTGTGAGAGATTTTATAACAGGGGCTCAGGAAAAAGTTTCTTTTACCAAACTGATTGATAAATTAATAAAGGAATAA
PROTEIN sequence
Length: 411
VFQPVRGTHDLLPDECRQYRFVVKEAMKVVRYYGFDEISTPIFEFSGVFHRLGETSDVVSKETYTFKDRGGEELTLRPEGTAGVVRAIISNGMAQHAPLKLSYAGPMFRYERPQKGRYRQFDQIGVELIGTATPVADVEVIAMAHHILKVLGVDSKVKLEVNTLGDYESREAYKKALLAYLTPLRSKLSPESQDRLERNPLRILDSKSEQDQAIVKEAPVYSDYLNATSKIFFKDVCEGLEVLEIPYKINTRLVRGLDYYCHTTFEFITDALGAHSAVIAGGRYDNLVEMMGGPHLPGVGWGAGVDRLALLGPELPKTMAPVAMIPLGDEAEKVCFKLAQDLRYKGIFVDMGYHGNLSKRLKRADKINATHAIIIGEDEIRAQEALVRDFITGAQEKVSFTKLIDKLIKE*