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SCNpilot_expt_500_p_scaffold_51_curated

Search features with annotation key words

Displaying items 61-90 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_51_curated_61
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(85748..86017)
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79892.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_62
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(86102..86818)
DNA (717bp) protein (239aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ung; uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
Uracil-DNA glycosylase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KUS3_PARAV
SCNpilot_expt_500_p_scaffold_51_curated_63
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

86963..87217
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79890.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Putative uncharacterized protein id=4350433 bin=GWC2_Chlamydiae_50_10 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_64
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

87427..88326
DNA (900bp) protein (300aa)
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_51_curated_65
R_Chlamydiae_27_8, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(88424..89041)
DNA (618bp) protein (206aa)
Putative LysE/RhtB family amino acid efflux pump n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YIN0_LYNSP
Lysine exporter protein (LYSE/YGGA)
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_27_8_curated
SCNpilot_expt_500_p_scaffold_51_curated_66
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89031..89492)
DNA (462bp) protein (154aa)
Putative AsnC-family transcriptional regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMG2_AZOBR
AsnC family transcriptional regulator {ECO:0000313|EMBL:AIB11456.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative AsnC-family transcriptional regulator
SCNpilot_expt_500_p_scaffold_51_curated_67
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

90692..90901
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79867.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_68
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

91009..91185
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79866.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_69
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(91121..91978)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8D3_9CHLA
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:CDZ79865.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_70
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(92009..92638)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L5I9_SIMNZ
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:CDZ79864.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
TetR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_51_curated_71
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(92622..93824)
DNA (1203bp) protein (401aa)
Uncharacterized protein Rv1260/MT1298 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9G1_SIMNZ
6-hydroxynicotinate 3-monooxygenase {ECO:0000313|EMBL:CDZ79863.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_72
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(94089..95225)
DNA (1137bp) protein (379aa)
rumA; 23S rRNA (Uracil-5-)-methyltransferase; K00599 [EC:2.1.1.-]
Uncharacterized RNA methyltransferase pc1998 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Y1998_PARUW
23S rRNA (Uracil-C(5))-methyltransferase RlmCD {ECO:0000313|EMBL:CDZ79862.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_73
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

95660..96442
DNA (783bp) protein (261aa)
Bifunctional protein glmU n=2 Tax=Parachlamydia acanthamoebae RepID=F8L283_PARAV
Bifunctional protein GlmU {ECO:0000313|EMBL:CDZ79861.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
bifunctional protein glmU
SCNpilot_expt_500_p_scaffold_51_curated_74
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

96439..97299
DNA (861bp) protein (287aa)
ggpS; geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Geranylgeranyl pyrophosphate synthase,chloroplastic n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L285_PARAV
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CDZ79860.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_75
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(97370..98437)
DNA (1068bp) protein (356aa)
Protein RecA n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9N0_PARUW
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
recA; recombinase A; K03553 recombination protein RecA rbh
SCNpilot_expt_500_p_scaffold_51_curated_76
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(98736..99284)
DNA (549bp) protein (183aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2); K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
Putative 5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Waddlia chondrophila RepID=D6YTB5_WADCW
SCNpilot_expt_500_p_scaffold_51_curated_77
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(99259..100533)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9N4_PARUW
MORN repeat variant {ECO:0000313|EMBL:CDZ79857.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_51_curated_78
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(100533..101156)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9N5_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ79856.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_79
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(101174..102847)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YTB2_WADCW
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:CDZ79855.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K02662 type IV pilus assembly protein PilM
SCNpilot_expt_500_p_scaffold_51_curated_80
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

102985..103233
DNA (249bp) protein (83aa)
Uncharacterized membrane protein ylmG n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV18_PARAV
YGGT family protein {ECO:0000313|EMBL:CDZ79854.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ylmG; membrane protein; K02221 YggT family protein
SCNpilot_expt_500_p_scaffold_51_curated_81
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

103230..104258
DNA (1029bp) protein (343aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
tRNA-dihydrouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8P9_9CHLA
dus; tRNA-dihydrouridine synthase
SCNpilot_expt_500_p_scaffold_51_curated_82
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

104417..104632
DNA (216bp) protein (72aa)
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
acylphosphatase id=4114155 bin=GWF2_Planctomycetes_42_9 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
SCNpilot_expt_500_p_scaffold_51_curated_83
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(104642..105919)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCY7_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ79851.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_51_curated_84
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(106056..106544)
DNA (489bp) protein (163aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=root RepID=R5ZYG4_9FIRM
SCNpilot_expt_500_p_scaffold_51_curated_85
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

106840..108675
DNA (1836bp) protein (612aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAI0_9CHLA
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:CDZ79849.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_86
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

108675..108848
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79848.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_51_curated_87
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

108835..109347
DNA (513bp) protein (171aa)
Cytochrome b6-f complex iron-sulfur subunit n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV97_PARAV
Cytochrome b6-f complex iron-sulfur subunit {ECO:0000313|EMBL:CDZ79847.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
petC; cytochrome b6-f complex iron-sulfur subunit
SCNpilot_expt_500_p_scaffold_51_curated_88
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

109353..110678
DNA (1326bp) protein (442aa)
Cytochrome b6 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV96_PARAV
Cytochrome b6 {ECO:0000313|EMBL:CDZ79846.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
petB; cytochrome b6
SCNpilot_expt_500_p_scaffold_51_curated_89
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

110688..114707
DNA (4020bp) protein (1340aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KV95_PARAV
Putative bifunctional cbb3-type cytochrome c oxidase subunit II/cytochrome c {ECO:0000313|EMBL:CDZ79845.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_51_curated_90
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

114842..116263
DNA (1422bp) protein (474aa)
hypothetical protein; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV94_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ79844.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Displaying items 61-90 of 160 in total

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