ggKbase home page

SCNpilot_expt_500_p_scaffold_18_curated

Search features with annotation key words

Displaying items 61-90 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_18_curated_61
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

63147..63677
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80801.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_62
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(63893..64741)
DNA (849bp) protein (283aa)
Putative procollagen-lysine 5-dioxygenase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9Z7_PARUW
Anp1 {ECO:0000313|EMBL:CDZ80802.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
procollagen-lysine 5-dioxygenase rbh
SCNpilot_expt_500_p_scaffold_18_curated_63
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(64766..65440)
DNA (675bp) protein (225aa)
SAM-dependent methyltransferases n=1 Tax=Helicobacter fennelliae MRY12-0050 RepID=T1CNC7_9HELI
Magnesium protoporphyrin O-methyltransferase {ECO:0000313|EMBL:CDZ80803.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
methylase/methyltransferase
SCNpilot_expt_500_p_scaffold_18_curated_64
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(65607..65957)
DNA (351bp) protein (117aa)
30S ribosomal protein S10 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXC7_PARAV
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
SCNpilot_expt_500_p_scaffold_18_curated_65
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(65968..68052)
DNA (2085bp) protein (695aa)
Elongation factor G n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXC6_PARAV
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
fusA; elongation factor G; K02355 elongation factor G
SCNpilot_expt_500_p_scaffold_18_curated_66
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(68068..68541)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS7_PARUW
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_expt_500_p_scaffold_18_curated_67
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(68719..69093)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS12_PARUW
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
SCNpilot_expt_500_p_scaffold_18_curated_68
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

69255..70394
DNA (1140bp) protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophi
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=DXR_PARUW rbh
SCNpilot_expt_500_p_scaffold_18_curated_69
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

70501..72456
DNA (1956bp) protein (652aa)
hypothetical protein; K01417 [EC:3.4.24.-] rbh
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEL4_PARUW
Metalloprotease MmpA {ECO:0000313|EMBL:CDZ80809.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_70
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(72538..72693)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80810.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_71
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(72707..73888)
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80811.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_72
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

74056..75831
DNA (1776bp) protein (592aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Multidrug resistance-like ATP-binding protein MdlA n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LB88_9CHLA
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI {ECO:0000313|EMBL:CDZ80812.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_73
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

75821..77599
DNA (1779bp) protein (593aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Uncharacterized ABC transporter ATP-binding protein TM_0288 n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LB89_9CHLA
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDZ80813.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_74
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

77568..78551
DNA (984bp) protein (328aa)
hypothetical protein; K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESM5_AMOA5
L-cysteate sulfo-lyase {ECO:0000313|EMBL:CDZ80814.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_75
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

78548..79345
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYK4_PARAV
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:CDZ80815.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_76
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

79472..80590
DNA (1119bp) protein (373aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80816.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_77
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

80634..81800
DNA (1167bp) protein (389aa)
UPF0672 protein C3orf58 n=1 Tax=Crassostrea gigas RepID=K1Q817_CRAGI
BTB/POZ domain protein {ECO:0000313|EMBL:CDZ80817.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
kbtbd3; kelch repeat and BTB (POZ) domain containing 3; K10471 kelch repeat and BTB domain-containing protein 3
SCNpilot_expt_500_p_scaffold_18_curated_78
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

81815..82792
DNA (978bp) protein (326aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=B3VP83_9BACT
Carboxylesterase NlhH {ECO:0000313|EMBL:CDZ80818.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
lipase/esterase
SCNpilot_expt_500_p_scaffold_18_curated_79
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

82884..83387
DNA (504bp) protein (168aa)
Uncharacterized low temperature-induced protein aLL0458 n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KYZ5_PARAV
Metalloregulation DNA-binding stress protein {ECO:0000313|EMBL:CDZ80819.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
low temperature-induced protein; K04047 starvation-inducible DNA-binding protein
SCNpilot_expt_500_p_scaffold_18_curated_80
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

83400..83981
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0ILI7_LEPFC
Uncharacterized protein {ECO:0000313|EMBL:CDZ80820.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K06966
SCNpilot_expt_500_p_scaffold_18_curated_81
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(83959..85407)
DNA (1449bp) protein (483aa)
exoribonuclease II (EC:3.1.13.1); K01147 exoribonuclease II [EC:3.1.13.1]
ribonuclease II n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B66C2A
Ribonuclease R {ECO:0000313|EMBL:CDZ80821.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_82
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

85546..86556
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB42_PARUW
Hemolysin C {ECO:0000313|EMBL:CDZ80822.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_83
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(86564..87703)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80823.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_84
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(87821..89944)
DNA (2124bp) protein (708aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
catalase; K03781 catalase [EC:1.11.1.6]
Catalase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBZ4_SPHS2
SCNpilot_expt_500_p_scaffold_18_curated_85
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(90144..90812)
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80825.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_86
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(90993..92942)
DNA (1950bp) protein (650aa)
Chaperone protein DnaK n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX90_PARAV
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hsp70, dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
SCNpilot_expt_500_p_scaffold_18_curated_87
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(92975..93580)
DNA (606bp) protein (202aa)
Protein GrpE n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX89_PARAV
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
grpE; protein grpE; K03687 molecular chaperone GrpE
SCNpilot_expt_500_p_scaffold_18_curated_88
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(93577..94761)
DNA (1185bp) protein (395aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX88_PARAV
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hrcA; heat-inducible transcription repressor hrcA; K03705 heat-inducible transcriptional repressor
SCNpilot_expt_500_p_scaffold_18_curated_89
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(94852..97911)
DNA (3060bp) protein (1020aa)
NAD-specific glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2]
Putative NAD-specific glutamate dehydrogenase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX87_PARAV
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:CDZ80829.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_90
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

98085..98609
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80830.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Displaying items 61-90 of 328 in total

View Taxonomy