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SCNpilot_expt_500_p_scaffold_128_curated_21

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 17398..17877

Top 3 Functional Annotations

Value Algorithm Source
Bacterial transcription activator, effector binding domain {ECO:0000313|EMBL:CDZ80214.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 338
  • Evalue 5.80e-90
Transcription activator effector binding id=1875075 bin=GWE2_Gammaproteobacteria_42_36 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 142.0
  • Bit_score: 124
  • Evalue 7.10e-26
transcription activator effector-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 142.0
  • Bit_score: 114
  • Evalue 3.00e-23

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 480
ATGACGAAACAAAACGCTATTATAAAAAAACCTGACTTAACATTCATAGGAATAACTTGCCGCACATCCAACGCTCCCGATAAAGCTCCTTTAGATATTGCGGCTCTTTGGAACAAATTTAATGCCGATAACATTTATGAGGTCATTCCCGATAAGGCATCCTATCAAATCTATGTACTTTACTGCGAATATGAAAAAGATCACACAAAACCCTATACGGTTCTAATTGGGTGTTTGGTTGACAAAGAAAATAGTTCCATTGATGGATTAACCACAATAACACTTCCAGCTTCATGCTATGAGGTTTTCGAAGCTGAGGGTGAATTTCCTCATAGTCTCATTAACACTTGGAACAAAATTTGGCACGCACCAATCAAGCGCACCTATACAGGAGATTTTGAGGAGTATGACCCACAATTTTTTCTTAAAAGCAACCACAAAGTTCCGATCTATATAGCAATTGACGATGATAGAAACTAA
PROTEIN sequence
Length: 160
MTKQNAIIKKPDLTFIGITCRTSNAPDKAPLDIAALWNKFNADNIYEVIPDKASYQIYVLYCEYEKDHTKPYTVLIGCLVDKENSSIDGLTTITLPASCYEVFEAEGEFPHSLINTWNKIWHAPIKRTYTGDFEEYDPQFFLKSNHKVPIYIAIDDDRN*