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SCNpilot_expt_500_p_scaffold_682_curated_1

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(46..1443)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 465.0
  • Bit_score: 912
  • Evalue 2.20e-262
Transcription termination factor Rho n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEQ4_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 468.0
  • Bit_score: 752
  • Evalue 3.50e-214
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 468.0
  • Bit_score: 752
  • Evalue 1.10e-214
  • rbh

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1398
ATGGATCCGGAAAACACTTATTCAGATACATCTTCAACTTTTGAAGAAAATCAAAATGAAAGACATAAACCTCAGTCTAGTGCTCAAGATACTACTGATATGATTCAAGAAAACAAGTTGACTTGCCCAACTCCTCAAGGAGAAATAACCAAAATAGCCGAAATTCAGAGAATGAATATCGACCAATTAAACTTGTTTGGAAAAAAAATTGGTCTAAAGCATTTAGGCTCTTTAACTAAATCTCAAATGGTTTTTGAAATTGTTAAAGCTCTCTCCGAAAATCCAAGTGAAATACTATACGGCGAAGGCGTTCTAGAAATTTTGCCAGACGGATTTGGTTTTTTACGCTCTCCCAATTATAACTATCTGCCTTCAGCTGAAGACATTTATGTATCCCCCGCTCAAATTAGAAGATTCGATTTAAAAAAGGGTGATACACTTTGTGGAACAATTCGTCCACCAAAAGATAAGGAAAAGTACTTTGCACTCTTAAAAGTAGATAAGATTAACGGTAAGTCTCCTGAAAAAGCACGTGAGCGCATTTTGTTTGAAAATCTCACGCCTCTTTATCCTAATGAAAGAATTATTATGGAAACTACCAAGGATAGGCTTTCTACTAGAGTATTAGATCTAGCAGCTCCTATCGGAAAAGGACAAAGGGGATTAATCGTTGCCCCGCCACGCTCTGGAAAAACAATTATTTTACAAAATATTGCAAATGCAATTGCTGAAAATAACCCTGAAATTAATCTGATAGTTTTAATGATCGGCGAAAGACCAGAAGAAGTAACCGACATGCAAAGAATTGTTAAAGGAGAAGTTGTTGCCTCAACTTTTGATGAACCACCAGAAAGACACGTTCAAGTCGCAGAAATGGTAATCGAAAAGGCAAGAAGGTTAGTAGAGCATGGTAATGACGTCGTTATTTTATTAGATTCTTTAACAAGACTTGCTCGTGCTTATAACACCATAGAACCACATTCTGGGAAAATCTTAACAGGTGGTATTGATGCTAATGCATTACATAAACCTAAAAAGTTTTTTGGAGCTGCAAGAAATATTGAGCAAGGTGGCTCATTAACTATTATAGCAACAGCATTGATTGATACAGGTTCTCGTATGGACGAAGTTATCTTTGAAGAATTCAAAGGTACAGGTAATATGGAACTTGTTCTTGACCGAGGTTGCGCAGAAAGAAGAGTTTATCCAGCGATCAATCTACTAAAAAGTGGTACAAGAAAAGAAGATCTTCTCTATCACCAAGAAGAATTAGAAAAAATTATTTTACTACGCCAAGCTGTAGCAGATCTATCTCCAGTGGATGCTATGAATTTAGTATTAGGTTTGCTTAAGAAAAATCCAAGCAATGTTCAATTACTTTATACATTAAAGCTATAA
PROTEIN sequence
Length: 466
MDPENTYSDTSSTFEENQNERHKPQSSAQDTTDMIQENKLTCPTPQGEITKIAEIQRMNIDQLNLFGKKIGLKHLGSLTKSQMVFEIVKALSENPSEILYGEGVLEILPDGFGFLRSPNYNYLPSAEDIYVSPAQIRRFDLKKGDTLCGTIRPPKDKEKYFALLKVDKINGKSPEKARERILFENLTPLYPNERIIMETTKDRLSTRVLDLAAPIGKGQRGLIVAPPRSGKTIILQNIANAIAENNPEINLIVLMIGERPEEVTDMQRIVKGEVVASTFDEPPERHVQVAEMVIEKARRLVEHGNDVVILLDSLTRLARAYNTIEPHSGKILTGGIDANALHKPKKFFGAARNIEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELVLDRGCAERRVYPAINLLKSGTRKEDLLYHQEELEKIILLRQAVADLSPVDAMNLVLGLLKKNPSNVQLLYTLKL*