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SCNpilot_expt_500_p_scaffold_18_curated_123

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(139661..142372)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion outer membrane ring component n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX56_PARAV similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 860.0
  • Bit_score: 803
  • Evalue 1.90e-229
General secretion pathway protein D {ECO:0000313|EMBL:CDZ80863.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 903.0
  • Bit_score: 1749
  • Evalue 0.0
sctC-B; type III secretion outer membrane ring component; K03219 type III secretion protein SctC similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 860.0
  • Bit_score: 803
  • Evalue 6.10e-230

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 2712
ATGAAAATAAGCCGTTTTTTTCAAAGTCTATCACTAAGACTTGTGCTAGTTACTTGTTCCATTTTTTCAAAGATTCATGGACAAAGTTTTATACAACAAGGGAATGATCCATCTTCATTCTCTAAATTTGATCCTGATACTGAAAAACAATGGAATTTCAAGCAAGAACCTCCATTTTCAAAGTCAGACACCAATTCCATTTTCGATTACCCTAACCAAAAAGATAATTTTTATCGCATTGAAGCTCCCGTAAAAACAGCAAATACGGCTACCGAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAGGTAGTTCGTCACCTTTACCCGCTCCACAAACACCAACAGCCACCCCATCTGCTACTCCTCCAGTAGTAAATGCTGCCACTTCTCCTATTTTTACCCCACAAACTACGACTCCCCCTTTGCAAAATCCAGAGTCACGGGCAAATAATGAAGCCCAAACGCCTGAACAAAAAGGGATATTAGTTAATTTTAACAATATAAGTATGGGAGAGTTGCTACGATATATAAGTCGTATATCTAATAAAAATTTTATCTTTGACGAAAACGATATTCAATTTAATGTAACTATTGTTTCTGAAGAAATGACAACTCTTGAAAATTTAATGACGGCTATTTTGCAAGAGTTACGCATTCATGATTTAAGTTTGTTAGAGCAGGGAAACAATCTAATTATTCATAAAAACCCACGCGTTGGGAGTTTAAATCGTGTAATTTCTGAAGATTTACCCGAAACTATGAAAGGTCCCCTTGGTGATATTGTAACGCAAGTATTTCGTTTAAACTCTATAGATGTTGAAACAGCTGCTACATTGCTAAGGCCAATGCTTTCTGAATTTGCCATTGTTTCAATTGTTAATACAACCAATCATATCATTGTTACTGATTTAACCTCTAATATCAGACAAATCGATACATTGTTAAAAAGTGTTGATTCACCATCTGGTGGATTAGTTATTGGTCAATACGTTGTAAGAAATGCTTTGATAGATACTTTAATTCAATTAGCTGACACGATCATTCGTCCTATTTCTCAAGACCAACCACTTATATTTGTACCTCACGCTGCCGCTAATAGCATTTTCATTGTATCAACTCCTTATTTTGTAGAACGTACCATTTCTATTTTGCAATATTTAGATCAAACGCAAGGAACAACTCAAATTTTAAATCCTAAAGATTTAAATTTTAATGGCACAGGCGCGCCTCTTGCTGGTAGATGGCGTATTGACGAAGCTGGACTTTGGCATTATGAGACAACTTTTCAAGGAGAAGCTCCCCCTGTTGGCAAATGGTCTTTAGACAATCAAGGGAATTGGAAGTTTGAACCTGGAATTTATGGAAGAGAAGGTGAAGGACCAGAAGGACGTTGGGAAAGAAAACCAAGAGGTTGGAGTTTTTTGTTAGCCCCTGGCAAAGCTATTTCTCCTGAAAGATTAATGAGGGAACAAAAATTTACTCCTGAACTTCCGGTTGGCAATTTAGAAAGAACTAAGTTTTATTTGTACAAACTTCTCTTTAGAAGAGGGGATCAAATTGTCATCGCTTTAAGTCGAATTGCTGAAAGCTTACAAATGACAGGGACTACAAACCAAGATTTGGTATCTGCCATCGGTAGCATTCAGTGGATTGAATCATCTAATTCTTTGGTTTTTACAGGAACTAGCCAATCGATTAGTAAGATCAAGGAATTGATTGAAGAAATTGACGTACCTTTAAGACAAGTTTTTTTAGAAATGTTAATACTAGAGACTACTGTTGATGACTCTTTAAATTTTTCTGTTAATGAAGGTGCACGTTTTGGTGGAGGAAGAACAGCTGGTAATGAAACGTTTATTTCAGCTGGTAGTACCATTCCCGCCATGTTAAACTCAACAGGTCCTAATACTTTTCCAAATCCGGCTGTTATCCAACCTAACCAAGTGGGTTTTAGCTTAGGTATTATTGGAGAAACCCTGACACACAATGGCACACATTTTGCTACTTTAGCAGCCCTTGTAAGAGCTGTGGATAGAAGAGACAGTGTAAAAGTTATTTTAAACCCTAAAATATTAACTGAAGATAACTCGCCAGCTGAAATATTTGTGGGAGAAAATACTCAATTTCCAACCCAATCGATCGCAAATAACGATGGTTTAATCGTTACTCAAAACTTTGAATTTAGAGATGTGGGTATTCGTTTACGCGTTACTCCCCTAATTGGAAATAATGATTTAATTACGTTAGATATCCAAGAAGAAGTAAGTCGTGTCATCTCTGGTGGAACACAACAAATAAACAACTTAAGTCAGCAGGTCATTGGTCCTACTACTACCGTTAGCCGTACTACTACAAAAGTACACGTTCCTGATGGATACTTTTTAGTACTCAGTGGTGCCATTCGAGATGCGGAAAGAAGACTTAGAGTACAAACTCCTTGTTTAGGCGGCATTCCAATTATTGGTGCAGCTTTTAGCGATAAGCTAGTTGTTGATGAAAAGCGAAATCTTATGATCTTTATTCATCCTAGAATCATTGATACAGAAGAACAAATTCAAAATCTTACAAAACACCAGCAAGATATTTATCGTATGAAAAATAGACGTAAATCTGTTTGGAAGTATGAAACTGAAGAAGCATTAGATTTCTTGAATTTAGAAGATATCGAAGATACTGAAGGTGAATTTGACCGCTATTAA
PROTEIN sequence
Length: 904
MKISRFFQSLSLRLVLVTCSIFSKIHGQSFIQQGNDPSSFSKFDPDTEKQWNFKQEPPFSKSDTNSIFDYPNQKDNFYRIEAPVKTANTATEQQQQQQQQQQQQQQGSSSPLPAPQTPTATPSATPPVVNAATSPIFTPQTTTPPLQNPESRANNEAQTPEQKGILVNFNNISMGELLRYISRISNKNFIFDENDIQFNVTIVSEEMTTLENLMTAILQELRIHDLSLLEQGNNLIIHKNPRVGSLNRVISEDLPETMKGPLGDIVTQVFRLNSIDVETAATLLRPMLSEFAIVSIVNTTNHIIVTDLTSNIRQIDTLLKSVDSPSGGLVIGQYVVRNALIDTLIQLADTIIRPISQDQPLIFVPHAAANSIFIVSTPYFVERTISILQYLDQTQGTTQILNPKDLNFNGTGAPLAGRWRIDEAGLWHYETTFQGEAPPVGKWSLDNQGNWKFEPGIYGREGEGPEGRWERKPRGWSFLLAPGKAISPERLMREQKFTPELPVGNLERTKFYLYKLLFRRGDQIVIALSRIAESLQMTGTTNQDLVSAIGSIQWIESSNSLVFTGTSQSISKIKELIEEIDVPLRQVFLEMLILETTVDDSLNFSVNEGARFGGGRTAGNETFISAGSTIPAMLNSTGPNTFPNPAVIQPNQVGFSLGIIGETLTHNGTHFATLAALVRAVDRRDSVKVILNPKILTEDNSPAEIFVGENTQFPTQSIANNDGLIVTQNFEFRDVGIRLRVTPLIGNNDLITLDIQEEVSRVISGGTQQINNLSQQVIGPTTTVSRTTTKVHVPDGYFLVLSGAIRDAERRLRVQTPCLGGIPIIGAAFSDKLVVDEKRNLMIFIHPRIIDTEEQIQNLTKHQQDIYRMKNRRKSVWKYETEEALDFLNLEDIEDTEGEFDRY*