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SCNpilot_expt_500_p_scaffold_18_curated_125

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(144271..145611)

Top 3 Functional Annotations

Value Algorithm Source
Putative flagellar motor switch protein (= type III secretion translocase SctQ) n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC5_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 456.0
  • Bit_score: 161
  • Evalue 1.50e-36
Type III secretion system protein {ECO:0000313|EMBL:CDZ80865.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 446.0
  • Bit_score: 862
  • Evalue 3.20e-247
sctQ; type III secretion system protein; K02417 flagellar motor switch protein FliN/FliY similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 456.0
  • Bit_score: 161
  • Evalue 4.60e-37

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1341
GTGAGCGCTGAAATACTAAGTTTTAGTGATTTAAATTTAAAAGAAATGCCTTCTTCTTTGGGCAGGTTAGAACCATTTTCATTAATTCAACTTTTAGATCGTTTTCTTTCAGAAAATTTCTTATTAGAATTTATAGCTAAATTTTCCTTACAACAATTGGAAGTAGAATGGAAAAATGGCTTATGGAAAAAAAATAGTGAAATAACAAATAGTTTTGCTAAAGAAATCTATACCTTAAAAATTAACTTTTCCTCAATTCAAGAAGAAGCCTATTTTTTAGTAAGTAAACATGATTTAAAAACCATGTTGGAATCTTTTTTGCAAATTCCTCAATCGAATGACTTGATCCATGAGGAGTTTTTAAAAGGTTTTTTATTATTTGTAGGATACGAAATAATTTCTATCTCGCAAAAGTCTTTAACTGAAAAGCAAAGCATTCGTCTCGAACTAACGTCAATAGATGATCTCACATTAGCCTTTACTCGTGATTTAGAAATAAAAATAAATAATAACATTTTTTTAACGCGGTTTATTTTTCCCGAAAATTTTGTTAATAATTGTACCGCCTTAAAAAAATCGACATTATGGAAAGAAAGTTCTCTTGCAAAACTTATTCCTCTGGAATTGAGTTTTGAAATTGGCAAGGTAGCTTTAAAACAACAAGAATGGCAAAAAGTAAAAATCGGTGATTTTATTTTATTAGACTCTTGTACTTTTGACCCAAACTTTGCTACAAAATCAGCCCTTATGTTGGTGCAAAACATCCCTTTTTATCAAGGTACTTGGTCAGAAAAAGGTTTTACAATAAAGAATAGGATTACATTTGAAGAGGTAAACTCCATGATTGATAAAAAATTTGGTCAAGATGATGACGAAGAAGAGGAAGATTTCAAAGGATTTAACTTTGATATAGATGACGAAGACGATGATGACGATGATGAAGATGAAGAAGACGATTTTTTATTTGAAGAAGATGAAGAGACTAAAAAACGTTTAAGAGAATTACAAAAAGATTTACAAAATGTTGGGCAAGATGAGGAAGAAGAGCAACAATCTTCTAATTTTTTAGCTTCGGAAACAGAAGCTTCACCATCTTCCATACAATCTGTGGATGCTAAAACTGGTGAATTAGAAAACATTCCTCTTCAAGTTGTTGTAGAAGTCAGTAGAGTCCATATGAATTTAGATAAAGTATTAGAATTGCAACCAGGAACCGTGCTTGATCTTCATAAGCCTTTAGAACCTAAAGTAATATTATCAATAAATGGTAAAAAAGTAGCTCAAGGAGAATTGCTAAAGTTAGGTGAAAATCTAGGTGTTAGAATTACTGAAATTGAATAG
PROTEIN sequence
Length: 447
VSAEILSFSDLNLKEMPSSLGRLEPFSLIQLLDRFLSENFLLEFIAKFSLQQLEVEWKNGLWKKNSEITNSFAKEIYTLKINFSSIQEEAYFLVSKHDLKTMLESFLQIPQSNDLIHEEFLKGFLLFVGYEIISISQKSLTEKQSIRLELTSIDDLTLAFTRDLEIKINNNIFLTRFIFPENFVNNCTALKKSTLWKESSLAKLIPLELSFEIGKVALKQQEWQKVKIGDFILLDSCTFDPNFATKSALMLVQNIPFYQGTWSEKGFTIKNRITFEEVNSMIDKKFGQDDDEEEEDFKGFNFDIDDEDDDDDDEDEEDDFLFEEDEETKKRLRELQKDLQNVGQDEEEEQQSSNFLASETEASPSSIQSVDAKTGELENIPLQVVVEVSRVHMNLDKVLELQPGTVLDLHKPLEPKVILSINGKKVAQGELLKLGENLGVRITEIE*