ggKbase home page

SCNpilot_expt_500_p_scaffold_18_curated_133

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(150924..152753)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion integral inner membrane ring protein n=2 Tax=Waddlia chondrophila RepID=F8LF08_9CHLA similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 615.0
  • Bit_score: 557
  • Evalue 1.60e-155
Type III secretion apparatus protein, YscD/HrpQ family {ECO:0000313|EMBL:CDZ80873.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 609.0
  • Bit_score: 1205
  • Evalue 0.0
sctD; type III secretion system protein SctD similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 615.0
  • Bit_score: 557
  • Evalue 5.20e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1830
ATGTCAGCAAAGATAGTAGCAGAAGATGGTTTACTTAAAGGTTTAGTTTTAACTTTAGACAAGGGTGAGGAATGGATAATAGGGCGAGATTCTCATTCTGTAAATTTAGTAATTGAAGATCCAGCAGCTTCTCGAAGACAAATGATCTGCCGCAAATTTGATGATAAATTCGAAATTGAAAACCTTTCTGATCACACCGCCATTTATTTAAACGGGAATGAAATTCAAGGCAAAACTTTTGTAAATAATGGAGATACTATTCAATTTGGCAACACCACTTATCGATTTTATCAAGATAGCAAAGCCCAAATTATTTCCGAAGAATCGCAAAATGAATATTCAAACGAAGAAAATGATGAGGAACCTCATTATTCAATTTATGACGACGAAGAGCCAATCGATCATTCCTTGTCAGAAGTAAATTTTGATATAACAGATACTGGAAGATGGCTTTTAAAAGTCATTGGTGGGCCAAATAATGGCGCAGAATTTTCGATGCAAAATGGACATAGCTATGTGATTGGAACAAACCCAAATCATTGCGATATTGTATTCCATGACACGAGCATTTCACGTCAACATGTCAAAATTACTATAAAAGATGATGACACAATTCAAATTGAGGATTTAAAAAGTCGCAATGGTACATTAGTCGATGGCAACGCTTTAACTGAACCTCAAACGTTAATTCCAAATTCTATTGTTAATATTGGAACCACTTCTTTTGTTATCTATGATAGAGAAGGTGAAATGCAAACTTTAATCTCACCTTTAATGCCCTCTATTGTAAAAATATTGCAAGAAGAAGAGCAAAAACCTCTTCAAGAAGCACAAGTGCCAACAACACCTAGTTTTGAGCAGGCAGCTTCAGCTCCAGATAGTGAAACAATGCCTGAAGTTAGCGAACCTATTGTTACCCCACCTCCTCCATCTTCGAGCAGTTTTTTTATTGTCGCTTCTGTTATTGGACTATTTATCCTAACAGGTCTTGGAACTACATTTTTATTTTATAATGAACCAGTACCTATTACGCAACAATACGATACTGAAGAAGCTTTAAAAAACGTTTTAGCTCCCTATCCTGACATTCGTCATTCTTTTAATAGTGGTACAGGTCGCTTAATATTGGTAGGACACGTATTAACCTCTAGCCAACGTCATCAACTCCTTTATGCCTTACAGTCTTTAAATTTTATTAAAACCGTAGATGATAGTGGGGTCATTATCGATGAAGGTGTTTGGAGTGAAATAAATCAAATTATTTCCAAAAATCCTAGTTGGAGAGGGGTATCTGTTAGCGCATCTGCTCCTGGAAAATTTGTAATTTCAGGCTCCTTACCCTCCCGCGCTCAAGCCGAACAAGTATTAGAATATATTTCTACCCATTTTTCTTACCTTTCTAATATAGAAAATAGAATAGTTGTCGAACAAGATGTGGTTGAAGCCTTTAATGTAGCTTTATTGAACAATGGTTTTCGCAATATTAAAGTGGAAATAAATGAAGGTAATGTAAGTTTATCTGGAACGATTCCAAATGGAACTTTAGAGCAATTTAATAAGGTTGTAGAGCAATTAAAAGGTAGTACGCATGTTCGCAACATACGCTCTTTTGTAACGGAAGGAGCTCCAGAAGCGACTCTTGTTAATATTACTGATCGTTATAATGTATCAGGGGTTTCAACGATTGGAAGTAAAACAAGTGTGATCATAAATGGGCGCATTTTAACGGTGGGTGATATTTTAGATGGAATGACCATTAGAGAAATTACCCCCTCTTATATTATGCTTGAAAGAGATAATGTTACTTATAGAATCGATTATAGCCGTTAA
PROTEIN sequence
Length: 610
MSAKIVAEDGLLKGLVLTLDKGEEWIIGRDSHSVNLVIEDPAASRRQMICRKFDDKFEIENLSDHTAIYLNGNEIQGKTFVNNGDTIQFGNTTYRFYQDSKAQIISEESQNEYSNEENDEEPHYSIYDDEEPIDHSLSEVNFDITDTGRWLLKVIGGPNNGAEFSMQNGHSYVIGTNPNHCDIVFHDTSISRQHVKITIKDDDTIQIEDLKSRNGTLVDGNALTEPQTLIPNSIVNIGTTSFVIYDREGEMQTLISPLMPSIVKILQEEEQKPLQEAQVPTTPSFEQAASAPDSETMPEVSEPIVTPPPPSSSSFFIVASVIGLFILTGLGTTFLFYNEPVPITQQYDTEEALKNVLAPYPDIRHSFNSGTGRLILVGHVLTSSQRHQLLYALQSLNFIKTVDDSGVIIDEGVWSEINQIISKNPSWRGVSVSASAPGKFVISGSLPSRAQAEQVLEYISTHFSYLSNIENRIVVEQDVVEAFNVALLNNGFRNIKVEINEGNVSLSGTIPNGTLEQFNKVVEQLKGSTHVRNIRSFVTEGAPEATLVNITDRYNVSGVSTIGSKTSVIINGRILTVGDILDGMTIREITPSYIMLERDNVTYRIDYSR*