ggKbase home page

SCNpilot_expt_500_p_scaffold_18_curated_275

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 301214..301771

Top 3 Functional Annotations

Value Algorithm Source
Putative regulatory protein, involved in type III secretion lcrH, sycD n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MD38_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 163.0
  • Bit_score: 224
  • Evalue 7.70e-56
Chaperone protein IpgC {ECO:0000313|EMBL:CDZ81016.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 372
  • Evalue 4.20e-100
lcrH; regulatory protein, involved in type III secretion lcrH, sycD similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 163.0
  • Bit_score: 224
  • Evalue 2.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 558
ATGGAAGACCATTTAAAAGAATTTAAATTAACGCCAAAAGTTCGGCAAAAACTTAAAGATAAAACTCTTTTAAAAGAAGAATTGGAAGCTGGAAAAACAGCCCAAGAGATTTTAGAGTTTTCCGATATATCGATGGCGAAATTTTATGGAGCTTCCTACAAATTATTTGAACACCAGCGTTTCGAAGATGCAAGCAATGCTTTTCTTTTTCTTGCCACCTTAAATCCTTATAACTATGACTATTGGGTTGGACTTGGGATGAGCTTGCAAATGCTAGGCGATTATGAATTAGCCATAGACGCCTACGAGATGGCAGCTATTTGTCAAGTCGACAATCCCGTTCCTTACTTTTATTTGGCCAAATGTTTATTTGCCATACATGATCGGGAGAGCGCTTTACAGGCTTTAGACTTAGCGGTTGAATATTCTTCTGAGCATGCCGAATATTCAGAAATGTTAATCCAAGCCTTAAAAGCTAAAGATTTACTCAATCAAATGGAACATCCTTTAAAAAAGAAACGCACACGTAAAAAGCCCAAAAGTGAGTTAAATGAGTAA
PROTEIN sequence
Length: 186
MEDHLKEFKLTPKVRQKLKDKTLLKEELEAGKTAQEILEFSDISMAKFYGASYKLFEHQRFEDASNAFLFLATLNPYNYDYWVGLGMSLQMLGDYELAIDAYEMAAICQVDNPVPYFYLAKCLFAIHDRESALQALDLAVEYSSEHAEYSEMLIQALKAKDLLNQMEHPLKKKRTRKKPKSELNE*