ggKbase home page

SCNpilot_expt_500_p_scaffold_1882_curated_13

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(10170..11024)

Top 3 Functional Annotations

Value Algorithm Source
gGPS1; geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 275.0
  • Bit_score: 280
  • Evalue 4.40e-73
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4S3_9CHLA similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 275.0
  • Bit_score: 283
  • Evalue 2.80e-73
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CDZ80590.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 564
  • Evalue 1.20e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 855
ATGCTTACATCTTCATACTGGAAAAATTTAACAAGTTTAATAGAAAATTGTTTAAATCAACTGATACCTTCTTCATCACAAGCTTATTCCAAGCTTTATGATGCCGCTAGATATTCACTCATAGGTTCTGGCAAAAGAATTAGACCAGTTCTAGCTTTAGCTATGACAGATTGCATAGGAGGATCTTTAGAAAAAGCTTTAACCCCCGCTTGCTGCATTGAACTTGTACACACTTATTCATTAATTCACGATGACCTTCCTTGTATGGATAATGATGATTTTAGACGAGGCAAACCCTCACTTCATAAAGCATTTCCTGAAGGGCACGCCGTGCTAACAGGTGACTTTCTACTTACGGAATCATTTTTTCAAATTTCCACTTCCCCACAACTCACATCTCAACAAAAAGTTCTTCTAATTAAAACTTTAAGCGAAAAATCAAGTGCTAAAGGAATGATTGGAGGACAAATAATGGATATTGAAGCTGATGGTCGTGAAATATCGTTACAAAATCTTCAAGAAATTCATAAATACAAAACAGGAGCTTTAATAACAACTTCTGTACTTTTTGGTGGAATAATTGGTAAAGCTACAAAAAAGCAACTTTTTCATATAGAGCAATTTGGTGAAAATATTGGGTTAGTATTTCAAATTACTGATGATATCTTGGATGCTCCTACCGATTTAAAATTAAAAACTCCTAAATCTACTTATGCAACTATTTTAGGTATAGAAAGCTCTAAAAAGATGGCTAATCAACATTTCGAGAAAGCACTTTTTCATCTTGATAAAATTAATGGAAAAAAAGAATATTTGACAGAGTTAGCACATGCTATTATAAATCGAAATGAGTAG
PROTEIN sequence
Length: 285
MLTSSYWKNLTSLIENCLNQLIPSSSQAYSKLYDAARYSLIGSGKRIRPVLALAMTDCIGGSLEKALTPACCIELVHTYSLIHDDLPCMDNDDFRRGKPSLHKAFPEGHAVLTGDFLLTESFFQISTSPQLTSQQKVLLIKTLSEKSSAKGMIGGQIMDIEADGREISLQNLQEIHKYKTGALITTSVLFGGIIGKATKKQLFHIEQFGENIGLVFQITDDILDAPTDLKLKTPKSTYATILGIESSKKMANQHFEKALFHLDKINGKKEYLTELAHAIINRNE*