ggKbase home page

SCNpilot_expt_500_p_scaffold_15890_curated_2

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1444..1914)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L069_PARAV similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 162.0
  • Bit_score: 173
  • Evalue 2.20e-40
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 156.0
  • Bit_score: 320
  • Evalue 1.20e-84
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 162.0
  • Bit_score: 173
  • Evalue 7.10e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 471
ATGAGTAAAGGAATGAACATTGTTCAAATTGCTGGACATTTAGGTGCAGATCCTGAAACAAGAGTGACTCCAAGCGGACAAAAAGTAACAACTTTTCGCATGGCAGTTAACGGAAAAAAAGGTGGGAGTGAGTATACTGTTTGGTGGAGAGTCACTGTATGGGGAGATAACCGTCTGTTGCCTTACTTAAAAAAAGGTTCGGCTGTTATTGTTATAGGTGATATGTCAAAACCTGAAATTTATACAGATAAAGAAGGTCGTCCACAAGTATCGTTGGAAATTACAGCGGAAATCATTCGTTTTAGTCCATTTGGAAGAAATGATCGACAAGAAGAAACGAATAATACTTCTTATGGTTCTTCAAATTCTTATGAAGAACGTTCCAATAATTCTTTCTCTTCTAATAGCTTTGGTGGGTTTGGATCATTTGAACCTTCTATGGCCGAAAAAGAAGATGAAGTTCCATTCTGA
PROTEIN sequence
Length: 157
MSKGMNIVQIAGHLGADPETRVTPSGQKVTTFRMAVNGKKGGSEYTVWWRVTVWGDNRLLPYLKKGSAVIVIGDMSKPEIYTDKEGRPQVSLEITAEIIRFSPFGRNDRQEETNNTSYGSSNSYEERSNNSFSSNSFGGFGSFEPSMAEKEDEVPF*