ggKbase home page

SCNpilot_expt_500_p_scaffold_13089_curated_5

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2718..2978

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS18_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 86.0
  • Bit_score: 132
  • Evalue 2.40e-28
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 173
  • Evalue 1.70e-40
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 86.0
  • Bit_score: 132
  • Evalue 7.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 261
ATGGCTAATCAAAGATCAAGAAGTCCATCTGATTCTTCCGATTTTCGTGGACGTAAAAGAAAGCAATGCCCTTTTACAGCAGCTGGCATTAAAGAGATTGATTACAAAGATACAAATACTTTGTCCAAATTTATCACAGAAAGAGGCAAAATTCTTCCTCGTCGTATTACTGGGGTTTCAGCTTATCACCAAAAACGTTTAGCAACTGCGATTAAAAGAGCACGTCACATGGCTCTTTTACCATTTGTTTTAGAAGTTTAA
PROTEIN sequence
Length: 87
MANQRSRSPSDSSDFRGRKRKQCPFTAAGIKEIDYKDTNTLSKFITERGKILPRRITGVSAYHQKRLATAIKRARHMALLPFVLEV*