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SCNpilot_cont_500_bf_scaffold_46_curated_125

Organism: scnpilot_dereplicated_Chloroflexi_2

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 146305..147078

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7S5_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 184.0
  • Bit_score: 224
  • Evalue 1.10e-55
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 184.0
  • Bit_score: 224
  • Evalue 3.40e-56
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCF85882.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 202.0
  • Bit_score: 224
  • Evalue 1.50e-55

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 774
ATGGAGGCATTTTTGACCTGGCAGTTAGCGCCCGGCGAAACAATGGTAATGATTGCCCCGGTTGTGAGTCGCAAGGAACCGGTTGACCAGAAAGCGTTACCTGCCGAGCGTAATCGGACGATAGAAGGACAATACACCGACTTGTGGGACGAAGTCACCTGCATCGAACGTGCTCGTCAAGGCGACCAGACCGCTTTCGCCGAGATATATCAGCACTTTGAGCGCCCGATATATAGTTTAATTTACCGCTTGATGGGTAATTCTGAGGACGCCTTCGACATAACCCAGGATGTGTTTGTCAAGGCTTATAAGGCGCTTGCCAGGACTTCGCCTGACCTGAACCTTTCCGCGTGGTTGCACCGGATTGCATCCAATACCTGCCTCGATGTTTTACGCCGCCGTAAAATCGTACGCTGGCTGCCCTGGGACCCTACCGAACACGCCAATATTACCCCGGCCTCGGAGAGTGACGAGCCGGAGTACCAGGTGGTAGGCCAGGAAACCAGGTTGCAAGTCCAGGCGGTCCTCAACCAGATGAACGAACGTTACCGCCTCTGCCTGATTTTACGTGAATACCAGGAGCTTTCTTGCGAGGAAATTGCCGAAATAATGGGCACCTCGCGCCAGGCCGTGAAATCTATGCTTTTCCGGGCCAGGGACCAATTTAGAGAAATTTATGAGAAACAACAGGTAGCGCAACTGAATTCAGGTAATACCCTCACAAGCGGCCAGCCCACTTCAAAGACCAAAGAAAAGAAAGGAGGGCGGCGCTAA
PROTEIN sequence
Length: 258
MEAFLTWQLAPGETMVMIAPVVSRKEPVDQKALPAERNRTIEGQYTDLWDEVTCIERARQGDQTAFAEIYQHFERPIYSLIYRLMGNSEDAFDITQDVFVKAYKALARTSPDLNLSAWLHRIASNTCLDVLRRRKIVRWLPWDPTEHANITPASESDEPEYQVVGQETRLQVQAVLNQMNERYRLCLILREYQELSCEEIAEIMGTSRQAVKSMLFRARDQFREIYEKQQVAQLNSGNTLTSGQPTSKTKEKKGGRR*