ggKbase home page

SCNpilot_cont_500_bf_scaffold_1799_curated_7

Organism: scnpilot_dereplicated_Chloroflexi_2

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6244..6729)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator effector binding n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWI7_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 163.0
  • Bit_score: 100
  • Evalue 1.90e-18
Marine sediment metagenome DNA, contig: S01H1_S24087 {ECO:0000313|EMBL:GAG14242.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 131.0
  • Bit_score: 158
  • Evalue 6.30e-36
transcription activator effector binding similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 163.0
  • Bit_score: 100
  • Evalue 6.00e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 486
ATGCTTGAAAGCGATGTACGAATTGTTCAACTTGAACCTATGAATATGGCGATGGCTTCTGGTTTCGGCCCCAGCCCGGAGGGGGAAGCCTGGAAAAAGTTACAGACCTGGGCGTCTTCCCAGGGACTGCTCGATAACCTGGGAGCTCACCGCTACTTCGGTTACAACAATCCCAGCCCGGCACCGGGCAGTCCTAACTATGGCTACGACCAGTGGATGACCGTGGGCCAGGAAGTGAAAGCCTCTCTAGAAGTCAGGTTATTCAACTTTCCCGGCGGGTTGTATGCTGTAACCAGGTGTCAACTCAAAAATATTACCGAGACCTGGGGGCAATTAGCTTTATGGCGGGAGAACAGCCCTTACCTGGGAGCCGACCATCAGTGGCTTGAAGAGTGTCTTACGCCGGAGGTTTTCCTGAAACAAACCGTTACCCCGGTGGAGGAAGCCGTTTTCGACCTGTATCTGCCGGTTCAAACCGAAGATTGA
PROTEIN sequence
Length: 162
MLESDVRIVQLEPMNMAMASGFGPSPEGEAWKKLQTWASSQGLLDNLGAHRYFGYNNPSPAPGSPNYGYDQWMTVGQEVKASLEVRLFNFPGGLYAVTRCQLKNITETWGQLALWRENSPYLGADHQWLEECLTPEVFLKQTVTPVEEAVFDLYLPVQTED*