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SCNpilot_cont_500_bf_scaffold_151_curated_71

Organism: scnpilot_dereplicated_Chloroflexi_2

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 85933..87585

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Rpb1 repeat containing protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HJ46_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 275.0
  • Bit_score: 92
  • Evalue 1.40e-15
RNA polymerase Rpb1 repeat containing protein similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 275.0
  • Bit_score: 92
  • Evalue 4.30e-16
RNA polymerase Rpb1 repeat containing protein {ECO:0000313|EMBL:ELR24713.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 275.0
  • Bit_score: 92
  • Evalue 1.90e-15

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Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 1653
TTGGAGAAGCCAACTAGCCAGCTAGTTGAAGAAGCCGTCCTGGCAATCAAACAGGGTGAGATAAGCCTCGAAACCGGGGCAACTCGCTTTGGCGAAGCCTGGCCCGAAATCAAGGGCGAAGTGGCTTTAATTCTCGACCTCGAAAAAGCTGGAAAGTCGTTCAAGACTGCCCTCCCCTCACCGGACCTGTCGAAGATATGGGCGCAAATCTTGCCCGACCTGACCATGGTAGACATTGTAGCGGGTAGCGAAACCACGCCGAATTCCAACCATGTTGCTTCACCCGACAGTGTGATAGCAGCGCATCTTACCCAGGATGAAAAACCTGGCCCGGTCACCCCACCTGTCAGCTCTGAAAAGAAACCGGAGCCAATCAAGTTACCGGCCCGAAAATCGACCTGGACGAAATGGCGTAAACCGCTGGCCTGGGCGGCAGCCATCGTACTTTTCGTGGTCCTTTCGCTGAGTAGCCTGGTAGGGGTGGCGCAGGCCGCCGAACCGGGCGACTTCTTCTACGGGACCAAACTCTGGCTGGATAACGCCCGCCAGTATGTCGCTTTCTCGCCCCAGGACAAACAGAACTTCGCCCTGTCGTATTGCGCGCATCGCTCGGAAGAACTGGAATGGCTGGTTAAAAACAACAAACTCCAGTACTTCTCGTCGGTAGCCGCCGATTATCGCCAGACCCTTCAAAATGCTTTCCCGAACGAAACTGTGACCCTTTCGAGCGACCAGGTTAACCAGCTAAAAGCCCAGCAAACCCGTCTGAACCAGCTATCCGGCCAACTTTCGACGGTTAACGCCGCCGGGGCCACCCAGGCCAGCGTCGAAGTTAATAAACTGGTTGAACAGCTTGACGCTTTCGAGGTTACACCTCAAAATAGCCCGGTGCCGACCACTACCGCCGGCACCCCTGGATATACGCCTACGGCCAGTCCTGGCGCGTCTATAACGCCGAGTGTTGCCCCTACTACCACTTCAGCCATTACCATAACCATCGGCGGGACCACAGCCCCGGCGCAGACTCCCACTATTACATCGACCGTTGGTGTTAGCCCTACCGTTGAGCTACCTACGGCTGGTATGACGGTAATCGTGCCGCCCGCAAGCACCCCGACTCCAACACCGAACCCTGGCAGCGATACAGGGGTGGTTCTGGCCTACCACACGACACCGGCCCCAACACCAACCCCGATGGTGGCTAACGATGGTGATGACCAGGATGATGACGGCAACGTAAATAATACTAATAATGACCACGATGCCGACGACCTGCCGTCCAATTCCAATGGCAGCGACGGTGGGAGCAATAGCAGTAACGGGAGTGGGAATAACGGTCAACAGGGACCCAACCAGACCAAGAAGGCTACCCCGGTACCGCCTACACCGCCTGCGCCGCCAACCCCGGTAGCCAATCCTACCCCGGAACCTCCGGCACCACCACCAACCCCGGAACCTCCGGCAGCCCCCACCATAGGGCCTGACAATGGCAATGGAAGTGGATCCGGCAATGGCAATGGTAAAGGCCCAAAAGATAACCAGCCAAAAGCAACCATAGCGCCGGACCCGCCCAAACCGGATAAACCTTCCAGCCCTCCAGACCCGCCAAACCCAACCAAAACACCGAAACCTGAAAAGACCAAGAAACCTTGA
PROTEIN sequence
Length: 551
LEKPTSQLVEEAVLAIKQGEISLETGATRFGEAWPEIKGEVALILDLEKAGKSFKTALPSPDLSKIWAQILPDLTMVDIVAGSETTPNSNHVASPDSVIAAHLTQDEKPGPVTPPVSSEKKPEPIKLPARKSTWTKWRKPLAWAAAIVLFVVLSLSSLVGVAQAAEPGDFFYGTKLWLDNARQYVAFSPQDKQNFALSYCAHRSEELEWLVKNNKLQYFSSVAADYRQTLQNAFPNETVTLSSDQVNQLKAQQTRLNQLSGQLSTVNAAGATQASVEVNKLVEQLDAFEVTPQNSPVPTTTAGTPGYTPTASPGASITPSVAPTTTSAITITIGGTTAPAQTPTITSTVGVSPTVELPTAGMTVIVPPASTPTPTPNPGSDTGVVLAYHTTPAPTPTPMVANDGDDQDDDGNVNNTNNDHDADDLPSNSNGSDGGSNSSNGSGNNGQQGPNQTKKATPVPPTPPAPPTPVANPTPEPPAPPPTPEPPAAPTIGPDNGNGSGSGNGNGKGPKDNQPKATIAPDPPKPDKPSSPPDPPNPTKTPKPEKTKKP*