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SCNpilot_expt_1000_bf_scaffold_286_curated_1

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(61..606)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J868_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 181.0
  • Bit_score: 297
  • Evalue 9.10e-78
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 178.0
  • Bit_score: 314
  • Evalue 7.80e-83
rpoE4; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 181.0
  • Bit_score: 297
  • Evalue 2.90e-78

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGGAAGAAACACCGTCCTTCAAGCGGGAGCTCCTGGCAACGCTCCCTTCGCTGCGCGCCTTTGCCGTTTCCCTGAGCGGCCGCCACGACAAGGCGGACGATCTCGTGCAGGACACGATGATGAAGGCCTGGGCCAAGCAGGACAGCTTCCAGATGGGCACCAACATCAAGGCCTGGCTGTTCACGATCCTGCGCAACGAATTCTATAGCCAGATGCGCAAGCGCGGCCGCGAGGTGCAGGACACCGATGGTGCCTTCACCGAACGCATGTCCGTGCATCCTTCGCAATACGGCATTCTCGACATGGCCGACTTCAAGAAGGCGCTCGATGGCCTGCCGCCGGACCAGCGCGAAGCGGTCGTGCTGATTGGCGCCTCCGGGTTCTCCTACGAGGAAGCCGCGCAGATTTGTAACTGCGCCGTCGGTACAATGAAGAGCCGGGTCAGCCGCGCTCGTGCCCGTCTGCAGGATGTTCTGGGCATCTCCGGCGAGGCCGATTACGGCCCTGACGCCGTCTCTACCCAGGTCACCACCACCAGCTTCTAG
PROTEIN sequence
Length: 182
LEETPSFKRELLATLPSLRAFAVSLSGRHDKADDLVQDTMMKAWAKQDSFQMGTNIKAWLFTILRNEFYSQMRKRGREVQDTDGAFTERMSVHPSQYGILDMADFKKALDGLPPDQREAVVLIGASGFSYEEAAQICNCAVGTMKSRVSRARARLQDVLGISGEADYGPDAVSTQVTTTSF*