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SCNpilot_expt_1000_bf_scaffold_286_curated_11

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(8922..9443)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2K4_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 164.0
  • Bit_score: 193
  • Evalue 1.80e-46
TRAP-type C4-dicarboxylate transporter, small permease similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 164.0
  • Bit_score: 193
  • Evalue 5.60e-47
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KEP68950.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 193
  • Evalue 1.90e-46

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Taxonomy

Thioclava dalianensis → Thioclava → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGCTGCTCAAACGCCTTTCCCAGATCGAGCTCGCGATCTGCGTGCTGCTCCTCGCCGCCATCACCGGGCTCGTCTTCGTTGCGGCGCTCATGCGCTTCTTCGGCCATCCGCTGATCTGGTCGGTGGATATGGCGCAGCTGCTCTTCATCTGGCTGTGCATGCTCGGCGCGACGCGTGCCATGCGCGAGAAATCGCATCTGGGCATGGAGGTACTGGTCAAGTACTTGCCCTATACGGCGCGCCTGTGGGTCGAGCTGGCCTGCTCTGTGGCTACGCTGGTCTTCCTCGGCGTCATCGCCGTGCTGGGCTTCCAGCTCGCCTGGCTCAATCGCGCCCGCATGTTCGGCGACTCGTCGATCTCCTATGCCTGGGTGACGGTCGCGGTGCCGGTGGGCTGCATCCTGCTGGGCATCGCGTTCATCCATAACATGGTGCGGGCGTGGCAGGGTCGGGACAAGGGCAAGCTGGTCTACACGCGCACCGCATCCGACAAGGATGCGCCTGCGGTGCTGGAGCTCTAG
PROTEIN sequence
Length: 174
MLLKRLSQIELAICVLLLAAITGLVFVAALMRFFGHPLIWSVDMAQLLFIWLCMLGATRAMREKSHLGMEVLVKYLPYTARLWVELACSVATLVFLGVIAVLGFQLAWLNRARMFGDSSISYAWVTVAVPVGCILLGIAFIHNMVRAWQGRDKGKLVYTRTASDKDAPAVLEL*