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SCNpilot_expt_1000_bf_scaffold_1286_curated_7

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 6466..7818

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1228055 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 440.0
  • Bit_score: 764
  • Evalue 9.20e-218
ribosomal protein S12p Asp88 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 442.0
  • Bit_score: 691
  • Evalue 2.20e-196
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC03_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 442.0
  • Bit_score: 691
  • Evalue 7.00e-196

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGACCCAAGCACCGAAAATCGGCCTCGTCAGCCTTGGCTGCCCGAAGGCTCTCGTGGATTCCGAGCGCATCCTCACCACCCTGCGGGCGCAGGGCTATGAGTTCTCCCGCGACTATGCCGGCTCGGATGTTGTGATCGTCAACACCTGCGGCTTCCTCGACAGCGCCAAGCAGGAGAGTCTCGAGGCGATCGGCGAGGCGCTCAACGAGAACGGCAAGGTGATCGTCACGGGGTGCCTGGGCGTCGAGGAGACGCTGATCCGCGAGACGCATCCCAATGTCCTCGCGGTGACCGGCCCGCACCAGTATGAGAGCGTGGTGAACGCGGTGCATGCGCACCTGCCGCCGGTGCCCAACAAATTCGTCGACCTCGTGCCCGAAGCCGGGCTCCGGCTGACGCCCAAGCATTACGCCTATCTCAAGATTTCCGAGGGCTGCAACAATCGCTGCTCGTTCTGCATCATCCCGCAGATCCGCGGCGACCTGAGCTCACGGCCCCTCGCCTCGGTGCTGTACGAAGCCGAGCGGCTGGTGAAGTCGGGCGTCAAGGAAATCATGGTGATCAGCCAGGACACGTCGGCCTATGGCGTGGACCTCAAATACGCGCCCAGCAAGTTCCACGGGCGCGACGTGACCGCGAAGTTCCAGACGCTGGCCGAGGAGATGGGCCAGCTCGACGTGTGGACGCGGCTTCACTACGTCTACCCTTATCCGCATGTCGACGCGGTGATCCCGCTGATGGCGGAGGGCAAGATTCTCCCCTATCTCGACATCCCCTTCCAGCACGCCTCGCCGCAGGTGCTCAAGGCGATGCGCCGCCCGGCCAACCAGGTGAAGACGCTCGACCGGATCAAATCCTGGCGCGAGATTTGCCCCGACCTCACCATCCGCTCCAACTTCATCGTCGGCTTCCCCGGCGAGACGGAGGAGGATTTCGAGTTCCTGCTCGACTGGATCGAGGAAGCCGAGATCGATCGCGCCGGCTGCTTCAAGTACGAGCCGGTCACCGGCGCGCCGGCCAATGAGCTTGAGGGCGTGGTGCCCGACGAGGTGATGGACGAGCGCTTCGCACAGCTCATGGAAGTGGCGCAGGGCGTCTCGACCGCGCAGCTCAGCAAGAAGGTCGGCCGCACCATCGACGTGCTGGTCGACGATGTGCGTCCGGCCGAAGGGCGTGCCATCGCCCGCTCCAAATGGGACGCACCCGATATCGACGGCCAGGTGATCATCGACAAGGCGCAGGGCATCAAGCCGGGCGACAAGGTGAGCGTCGTGGTGACGGGATCGGACGAGTACGACCTGTTCGCCGTACCGGCGAACGCCAGGGCAGCGCAGCCGGAGCTCGCGCACTGA
PROTEIN sequence
Length: 451
MTQAPKIGLVSLGCPKALVDSERILTTLRAQGYEFSRDYAGSDVVIVNTCGFLDSAKQESLEAIGEALNENGKVIVTGCLGVEETLIRETHPNVLAVTGPHQYESVVNAVHAHLPPVPNKFVDLVPEAGLRLTPKHYAYLKISEGCNNRCSFCIIPQIRGDLSSRPLASVLYEAERLVKSGVKEIMVISQDTSAYGVDLKYAPSKFHGRDVTAKFQTLAEEMGQLDVWTRLHYVYPYPHVDAVIPLMAEGKILPYLDIPFQHASPQVLKAMRRPANQVKTLDRIKSWREICPDLTIRSNFIVGFPGETEEDFEFLLDWIEEAEIDRAGCFKYEPVTGAPANELEGVVPDEVMDERFAQLMEVAQGVSTAQLSKKVGRTIDVLVDDVRPAEGRAIARSKWDAPDIDGQVIIDKAQGIKPGDKVSVVVTGSDEYDLFAVPANARAAQPELAH*