ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1286_curated_24

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(18389..18946)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC27_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 185.0
  • Bit_score: 311
  • Evalue 8.20e-82
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 185.0
  • Bit_score: 338
  • Evalue 5.10e-90
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 185.0
  • Bit_score: 311
  • Evalue 2.60e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCTGAGACCGCTTACGTCCCGCGTCTGCGCACGCAGTACGAAGAGTCCATCAGGGCCGACCTGCTCAAGCAGTTCGGCTACAAGAACGTCATGCAGCTGCCCAAGCTTGAGAAGATCGTTCTCAACATGGGTGTCGGCGAGGCCGTCAACGACACCAAGAAGGTGAAGTCGGCTGCTGCGGACCTCGAGAAGATCGCCGGCCAGAAGCCGGTCATCACGCATGCCCGCAAGTCGATCGCCGGCTTCAAGGTGCGCGAGAACATGCCGCTGGGCGTGAAGGTCACCCTTCGCAAGCAGCGCATGTACGAGTTCATGGACCGCCTGGTGAACATCGCGCTCCCCCGCGTGCGCGACTTCCGCGGCCTCAACCCCAATGCCTTCGATGGTCGTGGCAACTACGCCATGGGCATCAAGGAACACATCATCTTCCCGGAAATCTCCTACGACCAGATCGAACAGGTCTGGGGCATGGATATCGTGGTCTGCACGACGGCGAAGACGGATGATGAGGCCCGGGCTCTGCTCAAGGCCTTCAATTTCCCCTTCCGGCAGTAA
PROTEIN sequence
Length: 186
MAETAYVPRLRTQYEESIRADLLKQFGYKNVMQLPKLEKIVLNMGVGEAVNDTKKVKSAAADLEKIAGQKPVITHARKSIAGFKVRENMPLGVKVTLRKQRMYEFMDRLVNIALPRVRDFRGLNPNAFDGRGNYAMGIKEHIIFPEISYDQIEQVWGMDIVVCTTAKTDDEARALLKAFNFPFRQ*