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SCNpilot_expt_1000_bf_scaffold_1286_curated_35

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(23145..23765)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC38_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 205.0
  • Bit_score: 299
  • Evalue 3.60e-78
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 325
  • Evalue 6.50e-86
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 205.0
  • Bit_score: 299
  • Evalue 1.10e-78

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGATATTCAGGTCACTTCCCTCGACGGCAAGGACGCCGGTTCGCTCACGCTCAAGGACGACATCTTCGGTCTTGAGCCCCGCGCCGACATCCTTCACCGCATGGTGCGCTACCAGGGCCTCAAGGCCATGGCCGGCACGCATGACGTGAAGAACCGCGCCGAGATCGCGCTCACTTCCAAGAAGTGGGGCAACCAGAAGGGCGGCGGTTCCGCTCGTCACGGCTCGCGCCGTGCGCCGCAGTTCCGCGGTGGTGGTCGTGCGTTCGGTCCGACCCCGCGTTCGCACGCGATCGACCTGCCCAAGAAGGTCCGCGCGCTGGCTCTCAAGCACGCCCTCTCGGCCAAGGCCAAGGCGGGTGAACTGACGATCGTCGACACGCTCGCGACCAAGGAAGCAAAGACGGCGGCGCTCCGCACCACCTTCGGCAAGCTCGAATGGTCGAATGCGCTGATCGTTGATGGTGCAACGCTCGACCAGAACTTCGCTCTGGCCGCCCGCAACATCCCCCATATCGACGTGCTGCCCATCCAGGGCATCAACGTTGCCGACATTTTGCGCCGCAACCGGCTGGTCCTGACCAAGGCCGCCGTCGAAGCGCTGGAGGCGCGGTTCGCATGA
PROTEIN sequence
Length: 207
MDIQVTSLDGKDAGSLTLKDDIFGLEPRADILHRMVRYQGLKAMAGTHDVKNRAEIALTSKKWGNQKGGGSARHGSRRAPQFRGGGRAFGPTPRSHAIDLPKKVRALALKHALSAKAKAGELTIVDTLATKEAKTAALRTTFGKLEWSNALIVDGATLDQNFALAARNIPHIDVLPIQGINVADILRRNRLVLTKAAVEALEARFA*