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SCNpilot_expt_1000_bf_scaffold_96_curated_1

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(85..819)

Top 3 Functional Annotations

Value Algorithm Source
integral membrane sensor signal transduction histidine kinase; K10125 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 252.0
  • Bit_score: 133
  • Evalue 9.70e-29
C4-dicarboxylate transport sensor protein DctB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6R8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 247.0
  • Bit_score: 153
  • Evalue 3.70e-34
Uncharacterized protein {ECO:0000313|EMBL:KKB83643.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 168
  • Evalue 1.20e-38

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
TTGCCGACGACCGGTGAGAGAGCGCCTGAGCCAAGATACAGGCGCTGGGGCATTGCGACCCGCATCGCGCTCGCCTTCGTGCTTGTGGTCGGACTATCGAGTGTCGCCTGCCTCTCCGGCCTGGTACTTTACGAGCGTCTGTCGGTGGAGATGCAGCGCATTGCCCAGCGCGAGATACCACGCCTCACCGCTGCGACACGCCTGGCAGAGGTGGGCGCCGACATCAACGCCAGGGTAGCGCTGTTGTCTCGCGCCGAAGCCTCAGCTGAATTCGACGCCCATTATCGGGAAGGGCTGGCGCTGTTCGAGCGGTTGGATGCTGCAATCACCAGCTCCTCGGAGTGGCGCGACAATGCCGTCCTGCGGAGTCGCCAGCTCGAGCTGGCCAACAACCTGGCGTCGCTCCAGGCATTGGTCAGGTCGCGGTTTGCGCTTCAGCTCGGCCAGCGCACGCGCGTTGATGAGCTGCGTTGGCTGCAGTCGGACCTGATATTTGAGATTGAGCCACTGATCGATGACGCGCGCTTCAACATCGCGCGGGATCTCGAAAGCGCGGCATCTGCGGGCAGTGTGTTGAGAGAGACGGCGCGCAGCGAGGCGCTGTTGACCGCGCTGGCCCAAGCGAACCTGTCGATCGGGCTGCTGTCGCGCTTCTCGGAGGTGACGAACCGCAACGGCGTCAAGGACGCCCTCGCATTTCTCGACGACAGCACCGATGATGTTGATTTCCGCTGA
PROTEIN sequence
Length: 245
LPTTGERAPEPRYRRWGIATRIALAFVLVVGLSSVACLSGLVLYERLSVEMQRIAQREIPRLTAATRLAEVGADINARVALLSRAEASAEFDAHYREGLALFERLDAAITSSSEWRDNAVLRSRQLELANNLASLQALVRSRFALQLGQRTRVDELRWLQSDLIFEIEPLIDDARFNIARDLESAASAGSVLRETARSEALLTALAQANLSIGLLSRFSEVTNRNGVKDALAFLDDSTDDVDFR*