ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_96_curated_54

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 58218..59201

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter permease n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C6D2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 276.0
  • Bit_score: 274
  • Evalue 1.50e-70
Sugar ABC transporter permease {ECO:0000313|EMBL:EIM77384.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 276.0
  • Bit_score: 274
  • Evalue 2.10e-70
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 286.0
  • Bit_score: 265
  • Evalue 2.80e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitratireductor aquibiodomus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGGCGGAGACTCCCGGCTCCGCCACTCGCTCTTCCGGATCGACCGATGGTCTCGCTGACACCCCATCCGCTGGCAGTCCCCGCGCTCGGTCCGCCCGCGCGTATCGCCGATCCCATGACGATCGCGCCGCGGCGTCGGCCTACCTTGCGCCCGCCTTCGCGCTTGTCGCCATCTTCATCTGCCTGCCCATCGCGCTCACGCTGTGGATGTCGCTCAACGAGGTCGACCAGTTCGGCCGCTTCGGCGGCTTCGTCGGTCTTGGGCACTACCTCGCGCTGTTCTCCGATCCGCAGTTCATCGCCGCCGCGTGGCGCACCGTGATCTGGACCGTCAGCATCGTCGCCGCCACCACCGTGATCGCCCTGTTCCTCGCCGTCGTGCTGCAGCAGAAGTTCCGCGGCCGGGCGCTGGTGCGGGGCCTCCTGCTCCTGCCCTGGGCCACCGGTCTCGTCATCGTCAGCCTGCTCTGGCGCTGGATGGCGCATCCCGATTTCGGCGCCATCGGCCGTGTGGTGAACGCCATCGGGTTCCCGGCGCTGCGCGTCGAGTGGCTGGGCAATCCCGCGCTCGCCTTCCCGCTGATGATCTGGGTGGGCATCTGGGCGTCGATCCCGTTCACCACGCTGGTGCTCGCCGCCGGCATCCAGTCGATCGACACCGATCTCTACGAAGCCGCGACGCTCGACGGCGCGAGCCAGTGGCGGCTGTTCCGCGACATCACGCTGCCGCAGCTTCGTCCGGTGCTCGCCGTGTCGATCCTGCTCAACGTGATCTTCGTGTTCAATTCCTTCCCCATCATCTGGGTGATGACGGAGGGCGGCCCGGCGGGCGCCACCGACACGCTGATCACCTTCCTCTATCGCAAGGGCTTCCGCTTCTACGATATGGGCGCCGCCTCGGCGACCTCGGTGGTGGTCTTCGCGATCCTCCTCGGCTTTGCCATCCTTCACACGCGCATCATGTGGCGGAACGTGCTCCGATGA
PROTEIN sequence
Length: 328
VAETPGSATRSSGSTDGLADTPSAGSPRARSARAYRRSHDDRAAASAYLAPAFALVAIFICLPIALTLWMSLNEVDQFGRFGGFVGLGHYLALFSDPQFIAAAWRTVIWTVSIVAATTVIALFLAVVLQQKFRGRALVRGLLLLPWATGLVIVSLLWRWMAHPDFGAIGRVVNAIGFPALRVEWLGNPALAFPLMIWVGIWASIPFTTLVLAAGIQSIDTDLYEAATLDGASQWRLFRDITLPQLRPVLAVSILLNVIFVFNSFPIIWVMTEGGPAGATDTLITFLYRKGFRFYDMGAASATSVVVFAILLGFAILHTRIMWRNVLR*