ggKbase home page

SCNpilot_expt_1000_bf_scaffold_96_curated_256

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 278996..279649

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 216.0
  • Bit_score: 314
  • Evalue 8.70e-83
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB12693.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 214.0
  • Bit_score: 338
  • Evalue 7.90e-90
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 216.0
  • Bit_score: 314
  • Evalue 2.70e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCCGCGCCGCATTATTATCGTCGACGATCATCCGCTGTTCCGTGCCGCCCTGCGCCAGACGCTGGCCGGCGGCACCGACGATATCGCTGTCGAGGAGGCCGGTGACCTCAACGCGCTGACGGCGGCGCTCGAGGCGGACCGCGACTGCGACCTCGTGCTGCTCGACCTCAACATGCCCGGCGGGCACGGCATCTCGGGCCTGCTGCTGCTGCGCGCGCAATATCCCGAAGTGCCGGTCATGATTATCTCGGCGGTGGAGGATCATAAGGTGATCCGCCGCACCTTCGATCTGGGCGCCGCGGGCTACCTGCCCAAATCGGTGGGACCAGCCGATATCCGCAAAGCCATCGATACGGTGCTGAGCGGCGAAATCTCGGTGCCCGACGGTGTCAGCCTCGATGGCGACGACGAGCAGTCGGCCTTCATCCGCCGGCTCGCCACGCTGACGCCGCAGCAGATCCGCGTGCTGATGATGCTGAGCGACGGCCTCATGAACAAGCAGATCGCCTACGAACTCTCGATCTCGGAGGCGACGGTGAAGGCGCACGTCTCGTCCATCCTGCAGAAGCTCGACGTCGACTCCCGCACCCAGGCCGTCATTGCCGCCAGCAGGATCGAGCAGGGCCAGTTCGAGGCGCTGCTCGAGGGTTAA
PROTEIN sequence
Length: 218
MPRRIIIVDDHPLFRAALRQTLAGGTDDIAVEEAGDLNALTAALEADRDCDLVLLDLNMPGGHGISGLLLLRAQYPEVPVMIISAVEDHKVIRRTFDLGAAGYLPKSVGPADIRKAIDTVLSGEISVPDGVSLDGDDEQSAFIRRLATLTPQQIRVLMMLSDGLMNKQIAYELSISEATVKAHVSSILQKLDVDSRTQAVIAASRIEQGQFEALLEG*