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SCNpilot_cont_1000_p_scaffold_782_curated_3

Organism: scnpilot_dereplicated_Gammaproteobacteria_1

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(2308..3030)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2K2A6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 240.0
  • Bit_score: 294
  • Evalue 7.80e-77
Uncharacterized protein {ECO:0000313|EMBL:KKO10702.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 240.0
  • Bit_score: 297
  • Evalue 2.20e-77
fliA; flagellar biosynthesis sigma factor; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 237.0
  • Bit_score: 292
  • Evalue 1.20e-76

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 723
ATGGGTGGAGCGGCACTATATAAAACTTGTCAACTGGACGCTAATGAGAGTTTTATCAAAGAGTATGCGCCATTAGTTAAACGTATTGCGCATCATTTGTTAGCGCGACTTCCTTCTATCATTCAAGCTGAAGATCTTATTCAAGCGGGAATGATAGGCCTTATCGAGGCAGCAAGGAATTTCGATGAACAAAAGGGCGCAACGTTTATTACGTATGCAGGAATACGTATTCGCGGTGCAATGCTAGATGAAATTAGAAAAGGGGACTGGGCACCTCGCTCTGTCCATAAAAATACACGACGTGTTGCGCAAGCAATGCGCGAGGTAGAAAATTCAACAGGAAGAGATGCACGTGATGTCGATGTCGCACGTACATTAGGAGTAAGCCTGGAAGAATACCATCAAATTTTACAAGACTCTAATAGCTCTAGAATTTTTGCCTTTGAAGATCTTGGCGTTAATGAAGAGGCATTAGATTGCCCAACAACCAATCCTATTTCTGGCCCCTTAGAAGGGTTGCAAAGGGATGATTTCAAGCAAAAGCTAGGCGTAGAAATCGCTAAATTGCCTGAGCGAGAAAAACTTGTCTTAGCCTTATATTACGATGAAGAGCTTAATCTACGTGAAGTCGGTGAAGTGCTGGGTGTGAGTGAATCTAGAATTAGCCAAATTCATAGCCAAGCGATGTTGCGGTTGAAATCGCGCTTAGTAAACTGGAAATAA
PROTEIN sequence
Length: 241
MGGAALYKTCQLDANESFIKEYAPLVKRIAHHLLARLPSIIQAEDLIQAGMIGLIEAARNFDEQKGATFITYAGIRIRGAMLDEIRKGDWAPRSVHKNTRRVAQAMREVENSTGRDARDVDVARTLGVSLEEYHQILQDSNSSRIFAFEDLGVNEEALDCPTTNPISGPLEGLQRDDFKQKLGVEIAKLPEREKLVLALYYDEELNLREVGEVLGVSESRISQIHSQAMLRLKSRLVNWK*