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SCNpilot_cont_1000_p_scaffold_782_curated_8

Organism: scnpilot_dereplicated_Gammaproteobacteria_1

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(8444..9220)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthetic protein fliR n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MPR0_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 261.0
  • Bit_score: 220
  • Evalue 1.50e-54
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 259.0
  • Bit_score: 223
  • Evalue 4.40e-55
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 241.0
  • Bit_score: 218
  • Evalue 3.20e-54

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Taxonomy

Pseudomonas sp. FeS53a → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGATTCAGTTGACGCAAGATTTGCCCACACTTGTTTTGACGCTTTTTTTGCCTTTCGCCAGAATTAGTGCGATGGTGATGACTTTGCCTATTTTCGGAACACAATTGGTTCCGGCTAAAATTAAAATTATGTTGAGTTTAGCCCTCACTTTTATTGTGGCTTCTATGGGTAATATACAAGCACCTTCAACAGTAGATCCTTCGGTTATTTCTATTTTTTTATCCCTTGTGTATCAAATTATTATTGGTGTTATCTTTGGATTAATCATTCATATTATCTTCCAAGCATTCAATGTTGCAGGACAAATTATTGCCATGCAAATGGGATTAGGATTTGCGCAATTAGTTGATCCTCAAAGTGGCATATCGGTACCTGCTGTGAGCCAATTTTATATGATGGTGGCCACTTTGCTGTATTTGTCAATGAACGGTCACCTTTTTGTAGTGAGCGCTATCATTGAAAGTTTTAATACTTTACCAGCTGTTATTAATGCGTATAAACTTATTCCTTTTGAAGACATCATGCATTTGGGATCCGTGATGTTCATTTATGGGCTAAAAATTGCTTTACCCGCAGTTGTTGCCTTGCTAGTGACAAACATTGCATTTGGTGTGATGACAAAAGCCGCACCTCAACTGAATATCTTTACTATCGGTTTCTCCATCTCAATGCTAATTGGCATAGCGCTTATTTGGGTCAATTTAGCATTTATGTTGCCGCAGTTTAATGAATTGACTGAAGATACTCATACTACCTTGGCTGCGTTGTTCCAGTAG
PROTEIN sequence
Length: 259
MIQLTQDLPTLVLTLFLPFARISAMVMTLPIFGTQLVPAKIKIMLSLALTFIVASMGNIQAPSTVDPSVISIFLSLVYQIIIGVIFGLIIHIIFQAFNVAGQIIAMQMGLGFAQLVDPQSGISVPAVSQFYMMVATLLYLSMNGHLFVVSAIIESFNTLPAVINAYKLIPFEDIMHLGSVMFIYGLKIALPAVVALLVTNIAFGVMTKAAPQLNIFTIGFSISMLIGIALIWVNLAFMLPQFNELTEDTHTTLAALFQ*