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scnpilot_p_inoc_scaffold_903_curated_29

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 28816..29844

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 342.0
  • Bit_score: 649
  • Evalue 1.90e-183
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 337.0
  • Bit_score: 493
  • Evalue 5.20e-137
tRNA-dihydrouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNF3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 342.0
  • Bit_score: 649
  • Evalue 1.40e-183

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCAGATCGGGGCCCACGTCCTGCCCAATGCCCTGTTCGTCGCGCCCATGGCCGGGGTGACGGACCGGCCGTTCCGCAAGCTGTGCAAGCGGTTGGGCGCGGGCTACGCGGTGAGCGAGATGGTGACCAGCCGGCGCGAGCTCTGGGACAGCCTCAAAACCTCGCGCCGCGCCAACCACGAGGGCGAGTCCGCGCCCATCGCCGTGCAGATCGCGGGCACCGACCCCCAGTCCATGGCCGACGCCGCCCGCTACAACATCGACCGCGGCGCGCGCATCATCGACATCAACATGGGCTGCCCGGCCAAGAAGGTCTGCAACAAGTGGGCCGGCAGCGCGCTCATGCAGGACGAGGCGCTCGCCATCGGCATCGTCGAGGCCGTGGTGCGGGCCTGCGAGCCGCGGGGCGTGCCGGTCACGCTCAAGATGCGCACTGGCTGGTGCGCCGCGGTGCGCAACGCGCCGGTGCTGGCCCTGGCCGCCGAGCGCGCGGGCGTGCAGATGCTCACGGTGCACGGCCGCACGCGCGAGCAGGGCTACAAGGGGCAGGCGGAACACGACACCGTGGCCCACATCAAGAGCCTCGTGCGCATTCCGGTGGTGGCCAACGGCGACATCGATTCGCCCGAGGCCGCGCGCGAGGTGTTGCGGCGCACCGGCGCCGACGCCGTCATGGTCGGCCGCGCGGCGCAGGGGCGGCCGTGGATCTTCCGCGAGATCGCGCACTTCCTGGCCACGGGCGAGCACCTGCCGCCGCCCGCGCTGTCGCAGGTGAAGGGCTGGCTGCTCGACCACCTGGACGACCACTACGACCTGTACGGCGAAGACACCGGCGTGCGCAGCGCGCGCAAGCACCTGGGCTGGTACGTGCAGTCGCTGGCCCTGCCCGCGGGCGAGGCCGCGCGTTTTCGCGCGAGCGTCAACGCCACCCACACCATCGATGACCAACGCCGTGTCGTCAGCCAGGCCTTCGATGCCTGGATGGCCGCGGACTTCGGCGATCGCGCCGATTGGAAGCTGGCCGCATGA
PROTEIN sequence
Length: 343
MQIGAHVLPNALFVAPMAGVTDRPFRKLCKRLGAGYAVSEMVTSRRELWDSLKTSRRANHEGESAPIAVQIAGTDPQSMADAARYNIDRGARIIDINMGCPAKKVCNKWAGSALMQDEALAIGIVEAVVRACEPRGVPVTLKMRTGWCAAVRNAPVLALAAERAGVQMLTVHGRTREQGYKGQAEHDTVAHIKSLVRIPVVANGDIDSPEAAREVLRRTGADAVMVGRAAQGRPWIFREIAHFLATGEHLPPPALSQVKGWLLDHLDDHYDLYGEDTGVRSARKHLGWYVQSLALPAGEAARFRASVNATHTIDDQRRVVSQAFDAWMAADFGDRADWKLAA*