ggKbase home page

scnpilot_p_inoc_scaffold_8345_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 137..1678

Top 3 Functional Annotations

Value Algorithm Source
transposase IS1353 n=1 Tax=Pseudomonas veronii RepID=UPI00034BCB01 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 513.0
  • Bit_score: 773
  • Evalue 1.60e-220
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 513.0
  • Bit_score: 771
  • Evalue 1.50e-220
Integrase, catalytic region {ECO:0000313|EMBL:ABE47010.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 513.0
  • Bit_score: 771
  • Evalue 6.60e-220

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGTATTCGTATCAAGACAGGATTCGGGCGGTCGAGCTATACATCAAGCTTGGCAAGCGCGTTCGAGCAACCATTCGCCAGTTGGGGTACCCGACCAAGAATGCATTGAAGGGTTGGTTCCGAGAGTACGAGCGCAGTCGCGATCTGCCCAAGGGCTATGTGCGTCCCAAGCCGAAGTACTCCCAGGATCAGAAGGAGATCGCGGTCAGGCACTACCTTGAACATGGAAGGTGTGTTGCTGCAACGATCATGGCGCTGGGGTACCCGGGCCGTGCGTCATTGACCGCCTGGGTGGAAGAGCTCCATCCCGAATTGCGAGTCCGCTTGGTCGGTCACGCTGAGCGTGTCAGCCACTCCGCTGAACTCAAGCAGGCAGCGGTTATTGCGCTGTGCACTCGTCAAGGCAGTGCAGAGGCCTTGGCTCAGGAGATTGGCGTGTGCAGGCCGACGCTGTACAAGTGGAAAAACCGGCTACTTGACCGCGAGGCACCAGCATTCATGACGAACCCAAACGATATGCCAACGCCTGGCGCTGCCCGCGAAGAGCTGGAACGCCAACTTGAGGTCTTGCGACGGGACATCAGGCGCCTGCAGTTGGAACAAGACCTGCTCAAGAAGGCGAACGAAATCATAAAAAAAGACCTGGGCATCAACCAGCCGCCCCTGACCAATCGGGAGAAGACCCTGTTGGTTGATGCCCTGCGGAGCACGTACACGCTGTCTGAGCTTCTTGGTCAGGTGGGACTGCCGCGCAGCTCCTACTTCTACCATCGCGCTCGTCTGAATGCAGCGGACAGGTACGTCGAAGTACGACGCACCATCGCCGACATCTTTGAGCGCAATCACCGCTGCTACGGCTACCGCAGGATACGCGCCTCGCTGACCAAGCAAAGCGTCAGCATCTCCGAGAAGGTGGTGCAGCGTCTGATGAAACAGGAGTCGCTGGTGGCCGCCGCGCCCAAGCGTCGCCGCTATGGTTCCTACCTGGGGGAAATCAGTCCGGCGCCTGAGAATCTCATCAACCGTGACTTCAGTGCGACCGCGCCCAATGAGAAGTGGCTCACGGATATCACGGAGTTCCAGATCCCCGCTGGCAAGGTGTATCTCTCACCCATGATCGACTGCTTCGATGGCATGGTCGTCAGCTGGGCAATTGGCACGCGTCCCGATGCGGCGCTGGTGAACTCCATGTTGGATGCCGCGATCGATGGCGTCGCCACCGGTAGCGACCGGCCGGTCGTTCACTCCGATCGCGGCGCGCACTACCGCTGGCCGGGTTGGCTCAAGCGCATGGCCGACGCAAAGCTGGTGCGCTCTATGTCGCGCAAGGGGTACTCGCCAGACAACGCAGCGTGTGAAGGCTTCTTCGGCCGGCTGAAGACCGAGCACTTCTATCCCCGAGACTGGCAGTCCGCCACCATCGAACAGTTCATGCAGGCCTTGGACGCCTACATTCGCTGGTACAACGAGAAGCGGATCAAGATCTCTCTGGGCTTTCTCAGTCCAGTCGAGTACCGACGCAGCCTCGGAATCGTCGCTTAA
PROTEIN sequence
Length: 514
MYSYQDRIRAVELYIKLGKRVRATIRQLGYPTKNALKGWFREYERSRDLPKGYVRPKPKYSQDQKEIAVRHYLEHGRCVAATIMALGYPGRASLTAWVEELHPELRVRLVGHAERVSHSAELKQAAVIALCTRQGSAEALAQEIGVCRPTLYKWKNRLLDREAPAFMTNPNDMPTPGAAREELERQLEVLRRDIRRLQLEQDLLKKANEIIKKDLGINQPPLTNREKTLLVDALRSTYTLSELLGQVGLPRSSYFYHRARLNAADRYVEVRRTIADIFERNHRCYGYRRIRASLTKQSVSISEKVVQRLMKQESLVAAAPKRRRYGSYLGEISPAPENLINRDFSATAPNEKWLTDITEFQIPAGKVYLSPMIDCFDGMVVSWAIGTRPDAALVNSMLDAAIDGVATGSDRPVVHSDRGAHYRWPGWLKRMADAKLVRSMSRKGYSPDNAACEGFFGRLKTEHFYPRDWQSATIEQFMQALDAYIRWYNEKRIKISLGFLSPVEYRRSLGIVA*