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scnpilot_p_inoc_scaffold_5427_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1..4023

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2570
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 999.99
  • Bit_score: 2397
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSN8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2570
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4023
CCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGTGGCGTGATCTGCGAGAAGTGCGGCGTCGAAGTGACCCAGACCAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCCGCGCCCTGCGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCCTGGGCCTGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAGGCCTACGTGGTGACCGACCCCGGCATGACCCCGCTGAAGAAGTTCGGCATCATGTCCGAGGACGACTTCGACGCCAAGCGCAAGGAGTACGGTGACGAGTTCGTCGCCAAGATGGGCGCCGAGGGCATCAAGGAGCTGCTGGAGAACATCGACCTCGACATCGAGATCGAGAAGCTGCGCAACGACCTGACCGGCTCGGAACTCAAGATCAAGAAGAACGCCAAGCGCCTGAAGGTGCTCGAGGCCTTCAAGCGCTCGGGCATCAAGCCCGAGTGGATGGTGCTCGACGTGCTGCCCGTGCTGCCGCCGGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTACCGCCGCGTCATCAACCGCAACAGCCGCCTCAAGCGCCTGCTCGAACTCAAGGCGCCCGAGATCATCGCGCGCAACGAGAAGCGCATGCTGCAGGAAGCCGTGGACAGCCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACGGGCGCCAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGACTACTCGGGCCGTTCGGTCATCGTGGTGGGTCCGACGCTCAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTGGAAGCCATGGGCATCGCGACCACCATCAAGGCCGCGAAGAAGGAAGTGGAAGCCGGCACCCCCGTGGTGTGGGACATCCTCGAAGAGGTCATCAAGGAGCACCCGGTTCTGCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCCTTCGAGCCCATCCTGATCGAGGGCAAGGCGATCCAGCTGCACCCGCTGGTCTGCGCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGTCCGTGGAAGCCCAGCTGGAAGCCCGCACCCTGATGCTGGCCTCCAACAACGTGCTGTTCCCGGCCAACGGCGAACCCTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACTACGCCACGCGCGAGAAGATCAACGGCAAGGGCGAAGGCATGATCTTCGCGGACCTGCCCGAGCTGCAGCGCGCGCTGGACAACGGCGTGGTGGAACTCACCGCGCGCGTGAGCGTGCGCCTGGTCGAGTGGACCAAGGACAAGGCCAGCGGCGAGTTCGTCGCGGGCCTCAAGCTGGTCGACACCACCGTGGGCCGCGCGCTGCTGTCCGAGATCCTGCCCAAGGGCCTGCCCTTTTCGGTGCTGGACAAGCCGCTCAAGAAGAAGGAAATCTCGCGCCTCATCAACGCGAGCTTCCGCAAGTGCGGCCTGAAGGAGACCGTGGTCTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCCACGCGCGCGGGCATCTCGATCGCCGTCGACGACATGCTGGTGCCCAAGGAGAAGAGCGGCATCATCGAGCGCGCCGAGTCCGAGGTGAAGGAGATCGCCCAGCAGTACGCCTCCGGTCTGGTGACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCAAGGCCGGTGACGAGATCTCCAAGGTCATGATGGCCCAGCTGGCCAAGCAGAAGACCACGGACCGCAGCGGCAAGGAAGTGGACCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCGGGCGCCCGCGGTTCCGCGGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCCATCATCGAGACCCCCATCACGGCGAACTTCCGTGAAGGCCTCAACGTGCTGCAGTACTTCATCTCCACGCACGGCGCCCGCAAGGGCCTGGCCGACACGGCGCTGAAGACCGCGAACTCGGGTTACCTGACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTCACCCACCAGGACTGCGGCACCTCCAACGGCACGCTGATGCGCGCCATCGTCGAGGGCGGTGAGGTCATCGAGTCGCTGCGCGACCGCATCCTGGGCCGCACCACGGCCGAGGAAGTGATCCATCCCGAGACGCGCCAGCAGCTCGTGCCCGCGGGCGAAATGCTCGACGAGGACACCCTCGACCTGCTCGAGGCCGCCGGCGTCGACGAGGTCAAGGTGCGCACCGCGCTCACCTGCGAGACCCGCTACGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTCGGCCGCGGTGGCCTGGCCAACATCGGTGAGGCGGTGGGCGTGATCGCCGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTGACCATGCGCACCTTCCACATCGGCGGCGCGGCCTCGCGCGCGGCGGTGGCCTCCAGCGTGGAAGCCAAGTCCAGCGGCGTGATCGGCTTCAACGCCACCATGCGCTACGTGACCAACTCCAAGGGCGAGCTGGTGGTGATCGCGCGTTCGGGCGAGATCATCATCCAGGACGAACACGGCCGCGAGCGCGAGCGCCACAAGGTGCCCTACGGCGCCATCCTGGCGATCAAGCCCGACCAGCAGATCAAGGCCGGCACCATCCTGGCCAACTGGGACCCGCTGACCCGACCCATCATCACGGAATTCGCCGGCACGGTGAAGTTCGAAAACGTGGAAGAGGGCCTCACGGTCGCCAAGCAGGTCGACGACGTGACCGGTCTGTCCACGCTGGTGGTGATCGATCCCAAGCGCCGCGGCGCCACGAAAGTGGTGCGCCCGCAGGTCAAGCTGATCGACGCGTCCGGCAGCGAGGTGAAGATCCCCGGCACCGACCACGCCGTGACCATCGGCTTCCAGGTCGGCGCCCTGATCCAGGTGCGCGATGGCCAGGACGTGGGCCCCGGCGAGGTGCTGGCCCGCATCCCGGTCGAAGGCCAGAAGACCCGCGACATCACGGGTGGTCTGCCGCGCGTGGCCGAGCTGTTCGAGGCGCGTTCGCCCAAGGACGCCGGCATCCTCGCCGAGATGACCGGTACCGTGTCCTTCGGCAAGGAGACCAAGGGCAAGATCCGCCTGCAGATCACCGACCCCGAGGGCAAGGTCTGGGAAGAGCTCATCCCGAAAGAGAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGAGCATCGTCGACGGCCCGGCCGACCCGCAGGACATCCTGCGCCTGCTGGGCATGGAAGAGCTCGCGCGCTACATCGTCGATGAGGTGCAGGACGTCTACCGACTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCCGGCGATTCGTCCTACATCGGCGGCGAGCAGGTGGAGCGCTCGGAGATCCTCAACACCAACGACGCCCTGCGCGCCGACGGCAAGATCCCCGCGACCTACAGCAACGTGCTGCTCGGTATCACCAAGGCCTCGCTGTCGACCGACTCGTTCATCTCCGCGGCCTCCTTCCAGGAGACCACGCGCGTGCTGACCGAAGCGGCCATCATGGGCAAGCGCGACGAGCTGCGTGGCCTCAAGGAGAACGTCATCGTCGGCCGCCTGATCCCCGCGGGCACCGGCATGGCCTACCACGAGGCGCGCAAGGTCAAGGAGAAGATGGACGACGAAGAGCGCCGCGCCATCGCCGAGGCCGACGCCCTGTCGCTGGCGGCCGACCAGGCCGACGCGGCGGCTGGCGAGTCCGCCGAGTAA
PROTEIN sequence
Length: 1341
PIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFGIMSEDDFDAKRKEYGDEFVAKMGAEGIKELLENIDLDIEIEKLRNDLTGSELKIKKNAKRLKVLEAFKRSGIKPEWMVLDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLKRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLFPANGEPSIVPSQDVVLGLYYATREKINGKGEGMIFADLPELQRALDNGVVELTARVSVRLVEWTKDKASGEFVAGLKLVDTTVGRALLSEILPKGLPFSVLDKPLKKKEISRLINASFRKCGLKETVVFADKLLQNGFRLATRAGISIAVDDMLVPKEKSGIIERAESEVKEIAQQYASGLVTAGERYNKVVDIWGKAGDEISKVMMAQLAKQKTTDRSGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTHQDCGTSNGTLMRAIVEGGEVIESLRDRILGRTTAEEVIHPETRQQLVPAGEMLDEDTLDLLEAAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLANIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSSGVIGFNATMRYVTNSKGELVVIARSGEIIIQDEHGRERERHKVPYGAILAIKPDQQIKAGTILANWDPLTRPIITEFAGTVKFENVEEGLTVAKQVDDVTGLSTLVVIDPKRRGATKVVRPQVKLIDASGSEVKIPGTDHAVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARSPKDAGILAEMTGTVSFGKETKGKIRLQITDPEGKVWEELIPKEKNILVHEGQVVNKGESIVDGPADPQDILRLLGMEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGDSSYIGGEQVERSEILNTNDALRADGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHEARKVKEKMDDEERRAIAEADALSLAADQADAAAGESAE*