ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_2213_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2..754)

Top 3 Functional Annotations

Value Algorithm Source
Nitroreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT75_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 251.0
  • Bit_score: 440
  • Evalue 9.20e-121
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 245.0
  • Bit_score: 113
  • Evalue 1.40e-22
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 251.0
  • Bit_score: 445
  • Evalue 5.30e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGTTTGACAAGGTGGCCAAGTTGGCGGGCATCTTCAGCGAGGCCTTGCGCGACGCGGCGCTGTTCCTGCGCTTCAACTCGTACTCGCCGTTCGTGGACAAGTCCCGGCGCGCCTTCTACAAGATCATCATCGAGGCCCACACGATCGAGAAGGGCCTGTCGCTGCCGAGCCCGAAGCCGCTGTTCGGCAAGGACAAGGTCCGCTTCGTGATGAGCGCGCTCTCGCGCTACGACATCGGGCACTCGCCGGTGCCGGCCCACATGTCGCTGGGCGCGCTGGAGGCCTACCTGGCCTTCCACGCCCAGGCCGGCGCCAGCGACCCCCTGCTCGACGAGATCAGCGGCTACCTGAAGCAGTGGGAAACCCGGCTGCCCAGGCCGTGGCGGGGCGGCACGCGGGACTACCGTTTCGACGGCCAGCCCGCCGGCGACCTGCAGCACCTGATCGCCGGCCGCTCGAGCGTGCGCACGCTGTCGCCCGCGCCGCTCGACCCCGCGCGCATCCTCGAGGCGATCGCGCTCGCGCAGCAGGCGCCCTCGCAATGCAACCGCCAGGCCACCCGGGTGCACACCTACCAGGACCCGGCCCGCATCCAGGCACTGCTGGCGCTGCAGGGCGGCTCGCGCGGTTTCGCCGACACGGTCGGCAACCTGTTCGTGGTGAGTTCCGACATCTGCGCCTGGGGCGGCCCCGGCCAGCGCAACCAGGCCTATGTGGATGGCGCGCTGTTTGCCATGTGCCTGCTGCTGGCC
PROTEIN sequence
Length: 251
MFDKVAKLAGIFSEALRDAALFLRFNSYSPFVDKSRRAFYKIIIEAHTIEKGLSLPSPKPLFGKDKVRFVMSALSRYDIGHSPVPAHMSLGALEAYLAFHAQAGASDPLLDEISGYLKQWETRLPRPWRGGTRDYRFDGQPAGDLQHLIAGRSSVRTLSPAPLDPARILEAIALAQQAPSQCNRQATRVHTYQDPARIQALLALQGGSRGFADTVGNLFVVSSDICAWGGPGQRNQAYVDGALFAMCLLLA