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scnpilot_p_inoc_scaffold_6772_curated_2

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(231..557)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c551 {ECO:0000313|EMBL:EWS66035.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 108.0
  • Bit_score: 171
  • Evalue 4.90e-40
sulfite oxidation cytochrome c subunit 551/552 id=5079005 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 109.0
  • Bit_score: 167
  • Evalue 6.50e-39
cytochrome c551/c552 h16_A3570 similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 108.0
  • Bit_score: 126
  • Evalue 6.90e-27

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGTTGATTGCCGCCGCGACCGCGGTCGCGGCCGTGTCGGCGCTGCCGGCGCACGCGATGGACGCGGCGGCCGCCAAGGCCCTGGCGACCAAGAGCGCCTGCATGGCCTGCCACGCGGTCGACCGCAAGCTGGTCGGCCCGGCCTTCAAGGATGTGGCCGCCAAGCACAAGGGCCAGGCCGATGCGCCCGAGAAGGTGGCCGCGCGCATCAAGTCGGGCGGCTCGGGCCTGTATGGCCCGGTGCCCATGCCGCCCCAGCCCGGTCTCAAAGACGACGAATTGAGGCTATTGGCCGCCTGGGTGCTGGCCGGTGCCCCCGATAAGTAA
PROTEIN sequence
Length: 109
MLIAAATAVAAVSALPAHAMDAAAAKALATKSACMACHAVDRKLVGPAFKDVAAKHKGQADAPEKVAARIKSGGSGLYGPVPMPPQPGLKDDELRLLAAWVLAGAPDK*