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scnpilot_p_inoc_scaffold_1995_curated_7

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 6684..7388

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MGR0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 234.0
  • Bit_score: 470
  • Evalue 7.80e-130
VirB8 protein {ECO:0000313|EMBL:KDD60173.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 234.0
  • Bit_score: 470
  • Evalue 1.10e-129
trbF; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 234.0
  • Bit_score: 468
  • Evalue 1.20e-129

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCGATTCAAGAAACCGCAGGTGCGCTACGCCGACACGCCGCAGCCTGCCACGCCGTACCAAGCTGCCGGCCAGGTGTGGGACGACCGTATCGGCTCGCCGCGCGTGCAGGCGAAGAACTGGCGCCTGATGGCGTTCGGGTGCCTGACGCTCGCGCTGCTGATGGCCGGCGGCCTGGTGTGGCGCTCGGCGCAGTCCATCGTCACACCCTACGTCGTGGAGGTGGACAACACGGGCCAGGTGCGCGCCGTGGGCGAAGCCGCCACGCCGTACCGGCCGGGCGATGCGCAGACGGCGCACCACATCGCGCGCTTCGTGACGCTGGTGCGCTCGCTGTCCATCGACCCCATCGTCGTCCGGCAGAACTGGCTGGACGCCTATGACTACACGACCGACAAGGGCGCGGCCGTGCTCAACGACTACGCGCGGGTCAACGACCCGTTCGCGCGCATCGGCAAGGAATCGGTGACGGTGCAGATCGCCAGCGTCGTGCGCGCCAGCGACACGTCTTTCAACGTGCGCTGGACGGAACGCCGCTACGTCAACGGCGCCGCGGCGGGCCTGGAACGGTGGACCGCCGTGGTGTCCATCGTGCTCCAGCCGCCGCGCACCGAGGAACGCCTGCGCAAGAACCCGCTGGGCATCTACGTCAACGGCCTGTCGTGGAGTCGCGAACTGGATTCTTCCGAAGGAGCAAAACCATGA
PROTEIN sequence
Length: 235
MRFKKPQVRYADTPQPATPYQAAGQVWDDRIGSPRVQAKNWRLMAFGCLTLALLMAGGLVWRSAQSIVTPYVVEVDNTGQVRAVGEAATPYRPGDAQTAHHIARFVTLVRSLSIDPIVVRQNWLDAYDYTTDKGAAVLNDYARVNDPFARIGKESVTVQIASVVRASDTSFNVRWTERRYVNGAAAGLERWTAVVSIVLQPPRTEERLRKNPLGIYVNGLSWSRELDSSEGAKP*