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scnpilot_p_inoc_scaffold_18375_curated_2

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2287..2847)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI29_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 185.0
  • Bit_score: 326
  • Evalue 1.90e-86
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 185.0
  • Bit_score: 326
  • Evalue 2.60e-86
transcription elongation factor GreB; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 189.0
  • Bit_score: 280
  • Evalue 4.90e-73

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGCAAGGCATTCACCCGCGAATCCGATTCGGACGACGATGACGATGGCGTCGGCGCGCCGGCCACACCGGGCGGCAAGAACTACCTCACGCGCACGGGCTACGAGCGCCTGCGCCGAGAGCTCCTGGGCCTCATGGACGAGGAGCGGCCGAAGGTGGTCGAGGCCGTGCACTGGGCCGCCAAGAACGGCGACCGCTCGGAAAACGGGGACTACCTGTATGGCAAGAAGCGCCTGCGCGAGATCGACCGGCGCATCCGCTTTCTCACCAAGCGCCTGGAGATCGCCGAGGTGGTGGATCCCTCCGCGCACCACGGCAGCGACCAGGTGTTCTTCGGCGCCACCGTCACCTACGCGGACGGGTCGGGGCGCGAGACCACCATCACCATCATCGGCATCGACGAGGCCGACAGCACGCTAGGGCAGGTGAGCTGGGTGGCGCCGGTGTCGCGCGCCCTGCTCAAGGCCCGCGTCGGCGACGTGGTCAAACTCGCCGTGCCGGGCGGTGTGCAGGAACTCGAGGTGCTGGACGTGAGCTACCCGGCGCCCACTGCCGCCTGA
PROTEIN sequence
Length: 187
MSKAFTRESDSDDDDDGVGAPATPGGKNYLTRTGYERLRRELLGLMDEERPKVVEAVHWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVVDPSAHHGSDQVFFGATVTYADGSGRETTITIIGIDEADSTLGQVSWVAPVSRALLKARVGDVVKLAVPGGVQELEVLDVSYPAPTAA*