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scnpilot_p_inoc_scaffold_1102_curated_26

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(25332..26216)

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4Y9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 291.0
  • Bit_score: 489
  • Evalue 2.00e-135
Variovorax paradoxus strain MEDvA23 contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22922.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 291.0
  • Bit_score: 490
  • Evalue 1.30e-135
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 291.0
  • Bit_score: 489
  • Evalue 6.40e-136

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCCACTACTCGACATCCCCCTGCCCGTCCTGCTCAGCCAGTTGCTGCTGGGCCTGGTCAACGGCTCCTTCTACGCCATCCTCAGCCTGGGCCTGGCGGTCATCTTCGGTCTGCTGCACGTCATCAACTTCGCGCACGGCGCGCTGTTCATGCTGGGCGCGGTGCTCACCTGGATCGGCCTCAACCACTTCGGCATCAACTACTGGGCCATGCTGCTGCTGGCGCCGCTGCTGGTGGGGGCCTTCGGCATCGCCATCGAGCGCAGCTTGCTGCGCTGGATCTACCGGCTCGACCACCTGTACGGCATGTTGCTCACGCTGGGCATCACCCTGGTGCTGGAGGGCGTGCTGCGTGCCATCTTCGGTGCCTCGGGCCTGCCCTACAACGCGCCCGAAGCCCTGCAAGGCGCCACGCAGCTGGGTTTCATGTTTTTGCCCAATTACCGCATCTGGGTGGTGGTGGCCTCGCTCACGGTGTGCTTCGCCACCTGGTACCTCATCGAGCGCACGCGCCTGGGCGCCTACCTGCGCGCCGGCACCGAGAACCCCAAGCTCGTCGAGGCCTTCGGCATCAACGTGCCCCTGATGGTGATGCTCACCTACGCGTTCGGCGTGGGCCTGGCGGCCTTCGCGGGCGTGCTCGCGGCGCCAGTGATGCAGGTCTCGCCCCTCATGGGGCAGAACCTGATCATCGTGGTTTTCGCGGTGGTGGTGATCGGCGGCATGGGGTCGATCATGGGTGCCATCCTCACCGGGCTCGGCCTGGGCGTGCTCGAGGGCCTCACCAAGGTCGTGTACCCCGAGGCATCGGCCACCGTGGTCTTCGTGGTGATGGCGATCGTGCTGTTGCTGCGTCCCGCCGGCCTGTTCGGAAAGGAGCGTTGA
PROTEIN sequence
Length: 295
MPLLDIPLPVLLSQLLLGLVNGSFYAILSLGLAVIFGLLHVINFAHGALFMLGAVLTWIGLNHFGINYWAMLLLAPLLVGAFGIAIERSLLRWIYRLDHLYGMLLTLGITLVLEGVLRAIFGASGLPYNAPEALQGATQLGFMFLPNYRIWVVVASLTVCFATWYLIERTRLGAYLRAGTENPKLVEAFGINVPLMVMLTYAFGVGLAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAILTGLGLGVLEGLTKVVYPEASATVVFVVMAIVLLLRPAGLFGKER*