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scnpilot_dereplicated_Hydrogenophaga_1

scnpilot-dereplicated_Hydrogenophaga_sp__PBC_70_1
In projects: scnpilot-dereplicated  |  SCNpilot_P_inoc

Consensus taxonomy: Hydrogenophaga sp. PBC  →  Hydrogenophaga  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 428 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_p_inoc_scaffold_14761_curated
Species: Hydrogenophaga sp. PBC (80%)
5 3440 bp 70.81 1.00 98.28
scnpilot_p_inoc_scaffold_15132_curated
Species: Hydrogenophaga sp. PBC (100%)
3 3446 bp 71.97 1.00 100.38
scnpilot_p_inoc_scaffold_14165_curated
Species: Hydrogenophaga sp. PBC (100%)
4 3461 bp 71.71 1.00 88.85
scnpilot_p_inoc_scaffold_14859_curated
Species: Hydrogenophaga sp. PBC (100%)
4 3489 bp 73.03 1.00 96.04
scnpilot_p_inoc_scaffold_14538_curated
Species: Hydrogenophaga sp. PBC (83.33%)
6 3497 bp 65.37 1.00 85.62
scnpilot_p_inoc_scaffold_14166_curated
Species: Hydrogenophaga sp. PBC (100%)
4 3501 bp 67.98 1.00 100.00
scnpilot_p_inoc_scaffold_14839_curated
Species: R_Burkholderiales_67_14 (50%)
4 3509 bp 70.96 1.00 96.27
scnpilot_p_inoc_scaffold_14550_curated
Species: Hydrogenophaga sp. PBC (100%)
3 3515 bp 67.23 1.00 93.03
scnpilot_p_inoc_scaffold_14392_curated
Species: Hydrogenophaga sp. PBC (75%)
4 3528 bp 72.51 1.00 89.71
scnpilot_p_inoc_scaffold_14207_curated
Species: Hydrogenophaga sp. PBC (300%)
3 3543 bp 65.90 1.00 85.18
scnpilot_p_inoc_scaffold_14326_curated
Species: Hydrogenophaga sp. PBC (100%)
5 3549 bp 69.34 1.00 92.81
scnpilot_p_inoc_scaffold_13969_curated
Species: Hydrogenophaga sp. PBC (80%)
5 3655 bp 70.92 1.00 94.39
scnpilot_p_inoc_scaffold_16223_curated
Species: Hydrogenophaga sp. PBC (100%)
3 3662 bp 71.22 1.00 94.46
scnpilot_p_inoc_scaffold_13542_curated
Species: Hydrogenophaga sp. PBC (100%)
4 3749 bp 73.78 1.00 99.23
scnpilot_p_inoc_scaffold_13006_curated
Species: Hydrogenophaga sp. PBC (100%)
5 3788 bp 70.80 1.00 98.68
scnpilot_p_inoc_scaffold_12996_curated
Species: Hydrogenophaga sp. PBC (100%)
3 3833 bp 73.18 1.00 99.01
scnpilot_p_inoc_scaffold_12896_curated
Species: Hydrogenophaga sp. PBC (100%)
6 3890 bp 71.88 1.00 91.39
scnpilot_p_inoc_scaffold_12465_curated
Species: Hydrogenophaga sp. PBC (75%)
4 3890 bp 73.65 1.00 92.62
scnpilot_p_inoc_scaffold_12324_curated
Species: Hydrogenophaga sp. PBC (80%)
5 3972 bp 71.73 1.00 92.30
scnpilot_p_inoc_scaffold_13560_curated
Species: Hydrogenophaga sp. PBC (75%)
4 4003 bp 68.85 1.00 90.23
scnpilot_p_inoc_scaffold_12199_curated
Species: Hydrogenophaga sp. PBC (85.71%)
7 4007 bp 69.98 1.00 96.58
scnpilot_p_inoc_scaffold_11809_curated
Species: Hydrogenophaga sp. PBC (100%)
4 4025 bp 69.27 1.00 95.85
scnpilot_p_inoc_scaffold_11957_curated
Species: Hydrogenophaga sp. PBC (100%)
4 4087 bp 71.52 1.00 99.54
scnpilot_p_inoc_scaffold_14663_curated
Species: Hydrogenophaga sp. PBC (100%)
5 4189 bp 72.98 1.00 88.45
scnpilot_p_inoc_scaffold_11419_curated
Species: Hydrogenophaga sp. PBC (100%)
5 4228 bp 68.87 1.00 91.96
scnpilot_p_inoc_scaffold_11004_curated
Species: Hydrogenophaga sp. PBC (100%)
5 4296 bp 70.60 1.00 92.74
scnpilot_p_inoc_scaffold_11131_curated
Species: Hydrogenophaga sp. PBC (66.67%)
3 4304 bp 73.37 1.00 99.74
scnpilot_p_inoc_scaffold_11171_curated
Species: Hydrogenophaga sp. PBC (100%)
3 4309 bp 72.36 1.00 88.56
scnpilot_p_inoc_scaffold_10839_curated
Species: Hydrogenophaga sp. PBC (60%)
5 4366 bp 69.19 1.00 95.10
scnpilot_p_inoc_scaffold_18816_curated
Species: Hydrogenophaga sp. PBC (100%)
6 4392 bp 68.62 1.00 91.67
scnpilot_p_inoc_scaffold_10770_curated
Order: Burkholderiales (50%)
4 4430 bp 66.88 1.00 94.88
scnpilot_p_inoc_scaffold_10181_curated
Species: Hydrogenophaga sp. PBC (100%)
6 4525 bp 70.85 1.00 92.69
scnpilot_p_inoc_scaffold_10402_curated
Species: Hydrogenophaga sp. PBC (100%)
6 4568 bp 74.32 1.00 99.43
scnpilot_p_inoc_scaffold_9832_curated
Species: Hydrogenophaga sp. PBC (100%)
5 4733 bp 71.18 1.00 98.37
scnpilot_p_inoc_scaffold_9664_curated
Species: Hydrogenophaga sp. PBC (100%)
8 4750 bp 71.12 1.00 96.69
scnpilot_p_inoc_scaffold_9570_curated
Species: Hydrogenophaga sp. PBC (50%)
5 4804 bp 71.29 1.00 81.68
scnpilot_p_inoc_scaffold_9426_curated
Species: Hydrogenophaga sp. PBC (85.71%)
7 4826 bp 70.58 1.00 94.80
scnpilot_p_inoc_scaffold_14568_curated
Species: Hydrogenophaga sp. PBC (100%)
6 4830 bp 71.12 1.00 90.31
scnpilot_p_inoc_scaffold_17426_curated
Species: Hydrogenophaga sp. PBC (83.33%)
6 4838 bp 64.47 1.00 84.77
scnpilot_p_inoc_scaffold_9546_curated
Species: Hydrogenophaga sp. PBC (83.33%)
6 4844 bp 69.43 1.00 95.38
scnpilot_p_inoc_scaffold_9276_curated
Species: Hydrogenophaga sp. PBC (80%)
5 4914 bp 72.14 1.00 92.37
scnpilot_p_inoc_scaffold_9141_curated
Species: Hydrogenophaga sp. PBC (100%)
4 4944 bp 73.54 1.00 96.72
scnpilot_p_inoc_scaffold_10544_curated
Species: BJP_08E140C01_10KDA_Burkholderiales_65_51 (50%)
6 4988 bp 68.70 1.00 88.29
scnpilot_p_inoc_scaffold_9080_curated
Species: Hydrogenophaga sp. PBC (100%)
6 4991 bp 72.09 1.00 95.51
scnpilot_p_inoc_scaffold_8580_curated
Species: Hydrogenophaga sp. PBC (100%)
5 5118 bp 68.01 1.00 94.61
scnpilot_p_inoc_scaffold_8766_curated
Class: Betaproteobacteria (66.67%)
6 5120 bp 69.49 1.00 89.30
scnpilot_p_inoc_scaffold_8471_curated
Species: Hydrogenophaga sp. PBC (100%)
6 5200 bp 70.27 1.00 96.00
scnpilot_p_inoc_scaffold_8571_curated
Species: Hydrogenophaga sp. PBC (100%)
6 5215 bp 68.46 1.00 89.86
scnpilot_p_inoc_scaffold_8431_curated
Species: Hydrogenophaga sp. PBC (66.67%)
3 5234 bp 73.16 1.00 98.53
scnpilot_p_inoc_scaffold_18200_curated
Species: Hydrogenophaga sp. PBC (100%)
5 5247 bp 69.89 1.00 91.48
Displaying items 101-150 of 428 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.