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scnpilot_cont_500_p_scaffold_44_curated_32

Organism: scnpilot_dereplicated_Leifsonia_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 27363..27926

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RJN5_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 182.0
  • Bit_score: 359
  • Evalue 1.50e-96
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 182.0
  • Bit_score: 359
  • Evalue 2.20e-96
sigZ; putative ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 181.0
  • Bit_score: 188
  • Evalue 1.50e-45

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGCCGAGGTCCAGCGTGTCCGAGCTGTGGGAGGCGGCCGACGGCCTCCTCGCCGGGCGCGCGGCCGACGGCGACACGGTCGCGTTCGAGGTGCTGGTGCGCCGGCACGGTCCGCTGATGCGCGCCTATGCCGCCCGGATGCTCGGGTCGACCGACGAGTCGGACGACGTCGTGCAGGAGACGTTCGTCACCGCGTGGCGGCGGCTCGGCGAGCTGGACGAGGGGGCAGCGGTCAAGAGCTGGCTGATGCGCATCCTGAGCCGACGGTGCATCGACCGCATCCGCGTGCGTCACGAGCACGACGACATCTCGGAGCTCGACGCACCGGCCCCGGCGCGCGAGGAGCCGAGCCGGCTGGCCGAGACGCACTCCGCGACGGAGGCGCTGGGCGCGGCGCTCGACCGACTGCCCGAGCTGCAGCGGCGATGCTGGGTGCTCCGCGAAGTGGGGCAGTACAGTTACGACGACATAGCGGAGGAGCTCGGCATCCCCGCATCCACGGTGCGCGGCCAGCTGGCCCGGGGCCGCAAGAGACTGCTCGAGGCGATGGAGGACTGGCGATGA
PROTEIN sequence
Length: 188
VPRSSVSELWEAADGLLAGRAADGDTVAFEVLVRRHGPLMRAYAARMLGSTDESDDVVQETFVTAWRRLGELDEGAAVKSWLMRILSRRCIDRIRVRHEHDDISELDAPAPAREEPSRLAETHSATEALGAALDRLPELQRRCWVLREVGQYSYDDIAEELGIPASTVRGQLARGRKRLLEAMEDWR*