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SCNpilot_expt_1000_bf_scaffold_2763_curated_1

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: comp(1..126)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 42.0
  • Bit_score: 78
  • Evalue 2.20e-12
L-carnitine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN34_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 42.0
  • Bit_score: 78
  • Evalue 1.50e-12
3-hydroxyacyl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 42.0
  • Bit_score: 77
  • Evalue 1.10e-12

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
ATGACAATCATCGCCAAGGCAGCCACCATCGGCGGCGGCGTTATCGGCGCGGGCTGGGCCGCGCGCCTGTTGCTGAACGGCATCGACGTTTCGATTTTCGATCCGGACCCGGAAGCCAAGCGCAAG
PROTEIN sequence
Length: 42
MTIIAKAATIGGGVIGAGWAARLLLNGIDVSIFDPDPEAKRK