ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2276_curated_28

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 28268..28798

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 176.0
  • Bit_score: 318
  • Evalue 5.20e-84
UPI0003CDF42B related cluster n=1 Tax=unknown RepID=UPI0003CDF42B similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 176.0
  • Bit_score: 318
  • Evalue 3.70e-84
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 176.0
  • Bit_score: 317
  • Evalue 3.40e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC277A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGACGATCAAGCCGCTTATCATCCTTCCGGATCCCGTCCTGCGCGAGGTTTCAAAGCCTGTCGAAAAGGTCGACGCGCCGCTCCTGAAGCTGGCCGACGACATGCTGGCGACCATGTATGACGCCCCCGGCATCGGGCTCGCGGCCATACAGATCGGCGAGCCGCTGCGCATGCTGGTCATCGACCTTGCCAAGGAAGACGAGACGCCCACGCCGCACCTCTTCATCAACCCGGAAATCCTCGAAAGCGGCGATGCGCGCTCGGTCTACGAGGAAGGGTGCCTGTCGATCCCGGACTATTACGCGGAGGTCGAGCGGCCGGCGACGGTGCGCGTGAAATATCTCGACCGTGACGGCAAGACACAGGAAATCATGGCCGACGGCTTGATGGCGACCTGCCTGCAGCACGAGATCGATCACCTCAACGGCGTTCTCTTCATCGACCATATCTCGAAGCTGAAGCGCGATATCGTGATGCGGAAATTCAAGAAGCTGGCCAAGGACAAGCCGGCCGGCCGGATGGTCGGATAA
PROTEIN sequence
Length: 177
MTIKPLIILPDPVLREVSKPVEKVDAPLLKLADDMLATMYDAPGIGLAAIQIGEPLRMLVIDLAKEDETPTPHLFINPEILESGDARSVYEEGCLSIPDYYAEVERPATVRVKYLDRDGKTQEIMADGLMATCLQHEIDHLNGVLFIDHISKLKRDIVMRKFKKLAKDKPAGRMVG*