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SCNpilot_expt_1000_bf_scaffold_2275_curated_23

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 23628..24857

Top 3 Functional Annotations

Value Algorithm Source
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 400.0
  • Bit_score: 650
  • Evalue 3.90e-184
  • rbh
Bifunctional enzyme IspD/IspF n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=ISPDF_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 400.0
  • Bit_score: 650
  • Evalue 1.30e-183
  • rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 408.0
  • Bit_score: 691
  • Evalue 5.30e-196

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGCAGACCCGACCAACATTTCCCCGGCAGGACGTGCGAACCGGATCGCGGCGGTCATCGTTGCCGCCGGGCGGGGTGAGCGTGCGGGACAAGCTGACGGACCCAAGCAATACCGCACCATCGGCGGTCGCGCCGTTATTGCGCATACGCTGGAAACATTTCTGTCGCACCCGATGGTCGACATTGTGGTCGTTGCGATCCATACCGACGACAGGGAACTTTTCGATCACGCCGCCGGACGGGACTGCGAACGGGTCATCACAGTCATAGGTGGACCAACGCGGCAGGAATCGGTGCGGCTTGGACTTCTGGCGCTGCGGGATCATGCGCCTGCCAAGGTGTTGATCCACGACGCGGTACGGCCCTTCGCCGATGGCGAATTGCTCAGCCGGACCATCGAGACGATTGGGGACAGCCAAGGCGCGCTGCCGACGCTGCCGGTGGCCGATACACTTAAGCGCGAAGCATTCGGCGGCATGGTGGGCGAAACCGTGCCGCGCGCCGGATTGCACGGTGCGCAGACGCCGCAAGGCTTTCCTTTCGCTCCGATCCTCGAAGCACATGAGAAGGCGCATTTGATCGGCCGCCACGACTTCACCGACGATGCCGCTATTGCCGAATGGGCAAGCATTCCGGTCAAGCTGGTGCCCGGCTCGCCGGACAATGTGAAACTGACCTGGGCAAGGGATATTGCGATGGCTGACCAGAGGCTGAAGACGACGGCTCCGAGCTTTCCCGATGTGCGCACCGGCAATGGCTACGACGTGCACTCGTTCGAGGCGGGGGACCATGTCACGCTTTGCGGCGTCGCCATCCCGCATTCGAAGATGCTTTCCGGCCATTCCGATGCCGATGTCGGCTTGCACGCCCTGACCGACGCGTTGCTGGCAACCTGCGGCGCTGGCGATATCGGCACGCATTTCCCGCCTTCCGAACCACAATGGAAAGGCGCCGCGTCGCGGATATTCGTCGAACATGCCGTCAAGCTGGTGCGGCAACGCGGCGGGCGTATCGCCAATGCCGATGTGACACTCATTTGCGAGGCACCGAAAATCGGACCGCATCGCGAGGCTATGGTCGCCGCCTTGTCGACGATGCTCGGCATTTCAGGCGAGCGTATCTCGATCAAGGCGACGACGAACGAGAAACTGGGCTTTGTCGGCCGCGAGGAAGGCATCGCGGCCATCGCGACAGCAAGCGTGATCTATCCCGGCGAGGTACCGGAATGA
PROTEIN sequence
Length: 410
MADPTNISPAGRANRIAAVIVAAGRGERAGQADGPKQYRTIGGRAVIAHTLETFLSHPMVDIVVVAIHTDDRELFDHAAGRDCERVITVIGGPTRQESVRLGLLALRDHAPAKVLIHDAVRPFADGELLSRTIETIGDSQGALPTLPVADTLKREAFGGMVGETVPRAGLHGAQTPQGFPFAPILEAHEKAHLIGRHDFTDDAAIAEWASIPVKLVPGSPDNVKLTWARDIAMADQRLKTTAPSFPDVRTGNGYDVHSFEAGDHVTLCGVAIPHSKMLSGHSDADVGLHALTDALLATCGAGDIGTHFPPSEPQWKGAASRIFVEHAVKLVRQRGGRIANADVTLICEAPKIGPHREAMVAALSTMLGISGERISIKATTNEKLGFVGREEGIAAIATASVIYPGEVPE*