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SCNpilot_expt_1000_bf_scaffold_2528_curated_21

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: comp(24191..24940)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00036709B7 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 251.0
  • Bit_score: 404
  • Evalue 7.30e-110
Membrane protein {ECO:0000313|EMBL:EZQ15435.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 250.0
  • Bit_score: 431
  • Evalue 1.00e-117
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 251.0
  • Bit_score: 402
  • Evalue 1.10e-109
  • rbh

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGTCGGACGTAGTCAAGACTTCAGCCATGACGCGGCTCAGGAACTATTTCCTGACCGGCTTCATCGTCTGCGCCCCGCTGGCGATCACCGCCTATCTCACCTGGTCGTTCGTCGGCTGGGTCGATTCGTGGGTCAAGCCCTATATTCCCTCCCGCTACAGCCCGGACACCTATCTGCCATTCGCGGTTCCCGGCTTCGGCCTCATCGTCGCGCTGGTTCTGATCACGTTGATCGGCTTCCTCACCGCCAACATCGTCGGCCGCGCCATCGTCAATTTCGGGGAGCGCCTGCTTGGCCGCATGCCTCTGGTGCGCGGTATATACCGTTCGCTCAAACAGATTTTCGAAACCATCTTGTCCAACAAGGGCGACATGTTCAAAGCGGTCGGGCTAGTTGAATATCCGCGCAAGGACGTGTGGTCGCTGGTCTTCGTCCCCGGCGAGAAGCAGACCGAGATCAACGAGAAGCTGGATGCCGGCGACGATCCGCTGCTCGCCGTCTTCATGCCGTGCACGCCCAATCCAACCACGGGCTTTTTGATGTATGTGCGCAAGTCCGAGGTGGTCATGCTGGACATGACCATCGAAGAGGGTGCACGTCTCATCGTTTCGGCTGGCTTGGTGGCTCCGGACCTCAAGACCAAGCAGGCCGGCCCAAAAGGCGGGCCGATCAAGATTTCCAATCCGACATTGGATGAAGCTCAGCCGGCGCGCAGCAAGCGCACGGCTTCGTCCCTGCCGAACAAATAG
PROTEIN sequence
Length: 250
MSDVVKTSAMTRLRNYFLTGFIVCAPLAITAYLTWSFVGWVDSWVKPYIPSRYSPDTYLPFAVPGFGLIVALVLITLIGFLTANIVGRAIVNFGERLLGRMPLVRGIYRSLKQIFETILSNKGDMFKAVGLVEYPRKDVWSLVFVPGEKQTEINEKLDAGDDPLLAVFMPCTPNPTTGFLMYVRKSEVVMLDMTIEEGARLIVSAGLVAPDLKTKQAGPKGGPIKISNPTLDEAQPARSKRTASSLPNK*