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SCNpilot_expt_1000_bf_scaffold_2084_curated_22

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 19919..20731

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein (in rpoN upstream); K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 272.0
  • Bit_score: 468
  • Evalue 1.40e-129
  • rbh
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GS4_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 272.0
  • Bit_score: 468
  • Evalue 4.50e-129
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB50142.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 272.0
  • Bit_score: 468
  • Evalue 6.30e-129

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGATTTCATTTCCCAAGTTGCGCCTGCCTGGACTAGGGGCCGCGAGGCACGACGCGCCGGCCGTTGCGAAGTCGTCGTCCACCAAGCTGAAGGGCACCCTGATCGCCCGTGGGCTTTCCAAGAGCTACAAGGGCCGCAAGGTGGTGAGCGGCGTTTCGCTTGGCGTTCGGGCCGGAGAGGCCGTTGGACTGCTTGGTCCAAACGGCGCCGGCAAGACGACGTGCTTCTACATGGTCACGGGCCTCGTTCCGGTCGATGAGGGCACGATCGAGATCGACGGCTATGACGTCACCTCGATGCCGATGTACCGTCGTGCAAGGCTTGGCATCGGCTATCTGCCACAGGAAACTTCGATTTTCCGGGGCCTTACCGTCGAGCAGAACATTCGCGCCGTTCTCGAGGTGGTGGAAAAAAGCCGCAAGGAACGCGAGAGGAACCTCGACGAACTGCTTGAGGAATTCCACATCAGCCACTTGCGCAACGCCCCCTCCATGGCGCTTTCGGGCGGCGAGAGGCGTCGTCTGGAAATCGCTCGTGCACTGGCCAGCCGTCCGGCCTATATGCTGCTGGACGAGCCCTTTGCGGGCATTGATCCCATAGCGGTGGCCGATATCCAACAGCTTGTGCGCCATCTCACGGCACGCGGCATCGGCGTCCTCATCACCGACCACAATGTGCGCGAAACGCTGGGTCTGATCGACCGTGCCTACATCATCCATGCCGGCGAGGTTCTGACACATGGGCGAGCGGAGGAAGTCGTCGCCAACCCTGACGTGCGCCGGCTTTATCTCGGCGAAGGGTTTACGCTGTAA
PROTEIN sequence
Length: 271
MISFPKLRLPGLGAARHDAPAVAKSSSTKLKGTLIARGLSKSYKGRKVVSGVSLGVRAGEAVGLLGPNGAGKTTCFYMVTGLVPVDEGTIEIDGYDVTSMPMYRRARLGIGYLPQETSIFRGLTVEQNIRAVLEVVEKSRKERERNLDELLEEFHISHLRNAPSMALSGGERRRLEIARALASRPAYMLLDEPFAGIDPIAVADIQQLVRHLTARGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRAEEVVANPDVRRLYLGEGFTL*