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SCNpilot_expt_1000_bf_scaffold_851_curated_2

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 905..1816

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EB63DE similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 303.0
  • Bit_score: 569
  • Evalue 1.60e-159
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 303.0
  • Bit_score: 568
  • Evalue 1.10e-159
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 303.0
  • Bit_score: 568
  • Evalue 5.00e-159

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCCAGTCATTGCCCAGTATCGTTTCCGGAGAAGGCGGCCTTACCCGCTACCTGGAAGAAATCCGCCGCTTTCCCATGCTGCAGCCGCAGGAAGAGTACATGCTTGCCAAGCGTTACGGCGAGCATGACGACACGTCCGCGGCGCACAAGCTCGTCACCAGCCATCTGAGGCTCGTGGCCAAGATCGCCATGGGTTATCGCGGCTACGGCCTGCCGATCGGCGAAGTCATTTCGGAAGGCAATGTCGGCCTGATGCAGGCCGTCAAGAAATTCGAGCCGGAGCGTGGTTTCCGGCTGGCTACCTATGCGATGTGGTGGATCAAGGCCTCGATTCAGGAATACATCCTGCGCTCGTGGAGCCTGGTCAAGATGGGCACCACCGCCAACCAGAAGCGCCTGTTCTTCAACCTGCGCAAGGTGAAGGGCAAGATCCAGGCGCTGGACGACGGCGACTTGAAGCCCGAGCAGATCACCGAGATCGCCACGCGGCTGAACGTGTCCGAAGCGGAGGTGGTGTCGATGAACCGCCGCCTGTCGGGCGATGCCTCGCTCAATGCGCCGATCCGGGCGACCGAAGGCGAAAGCGGCGAGTGGCAGGACTGGCTGGTCGACGACCATGACAGCCAGGAAGAGATGCTGATCGAGCAAGACGAACTCGACAACCGTCGCGGCATGCTGGCGGGTGCGATGTCGGTGCTGAATGATCGCGAACGGCGCATCTTCGAGGCGCGCCGCCTCTCCGAAGAGCCGCTGACGCTGGAAGAACTGTCGGCAGAGTTCGATATCTCGCGTGAACGCGTGCGCCAGATCGAGGTGCGCGCCTTTGAAAAGGTGCAGGATGCGGTCAAGGCCGCAGCCAAGCGCCAGGCCCAGTCGCTGAGGACGATCGACGCCCATCCAGCCGGCTAA
PROTEIN sequence
Length: 304
MAQSLPSIVSGEGGLTRYLEEIRRFPMLQPQEEYMLAKRYGEHDDTSAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKVKGKIQALDDGDLKPEQITEIATRLNVSEAEVVSMNRRLSGDASLNAPIRATEGESGEWQDWLVDDHDSQEEMLIEQDELDNRRGMLAGAMSVLNDRERRIFEARRLSEEPLTLEELSAEFDISRERVRQIEVRAFEKVQDAVKAAAKRQAQSLRTIDAHPAG*